RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MYO1EQ12965 1108 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 TRPC3Q13507 836 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 BMS1Q14692 1282 aaKnown RBP16.17■□□□□ 0.18
HSPG2-201ENST00000374673 NCAPHQ15003 741 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 FAM171A1Q5VUB5 890 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 TAS1R1Q7RTX1 841 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 TMC7Q7Z402 723 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 TCF25Q9BQ70 676 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 VRTNQ9H8Y1 702 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 ENTPD7Q9NQZ7 604 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 SAMSN1Q9NSI8 373 aaKnown RBP16.17■□□□□ 0.18
HSPG2-201ENST00000374673 PCDHB8Q9UN66 801 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 SSX2IPQ9Y2D8 614 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 IRAK3Q9Y616 596 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 ARHGEF37A1IGU5 675 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 I3L4J1 428 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 PMM2O15305 246 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 N4BP1O75113 896 aaKnown RBP16.16■□□□□ 0.18
HSPG2-201ENST00000374673 URODP06132 367 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 TKTP29401 623 aaKnown RBP16.16■□□□□ 0.18
HSPG2-201ENST00000374673 NCOA4Q13772 614 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 SMC1AQ14683 1233 aaKnown RBP16.16■□□□□ 0.18
HSPG2-201ENST00000374673 PTPN14Q15678 1187 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 RTP2Q5QGT7 225 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 CDKAL1Q5VV42 579 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 KIAA0319Q5VV43 1072 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 DSTYKQ6XUX3 929 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 MYLIPQ8WY64 445 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 HPDLQ96IR7 371 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 SENP8Q96LD8 212 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 TTPALQ9BTX7 342 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 XYLT2Q9H1B5 865 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 MMRN2Q9H8L6 949 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 GDAP2Q9NXN4 497 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 MAGEC2Q9UBF1 373 aaPredicted RBP16.16■□□□□ 0.18
HSPG2-201ENST00000374673 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.16■□□□□ 0.18
HSPG2-201ENST00000374673 MTCH2Q9Y6C9 303 aa16.16■□□□□ 0.18
HSPG2-201ENST00000374673 CHD7Q9P2D1 2997 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 SMTNL1A8MU46 457 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 KCNJ18B7U540 433 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 P4HA2O15460 535 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 LILRB3O75022 631 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 HLA-DRAP01903 254 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 TYMPP19971 482 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 EEF1GP26641 437 aaKnown RBP16.15■□□□□ 0.18
HSPG2-201ENST00000374673 PIK3CAP42336 1068 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 FMO5P49326 533 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 MYL6P60660 151 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 KCNH2Q12809 1159 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 KCNJ12Q14500 433 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 IQCB1Q15051 598 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 CBWD6Q4V339 395 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 CBWD3Q5JTY5 395 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 CBWD5Q5RIA9 395 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 PLPP4Q5VZY2 271 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 KIAA1841Q6NSI8 718 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 PDXDC1Q6P996 788 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 LRSAM1Q6UWE0 723 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 CEP57Q86XR8 500 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 DHX40Q8IX18 779 aaKnown RBP16.15■□□□□ 0.18
HSPG2-201ENST00000374673 APPL2Q8NEU8 664 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 MICAL1Q8TDZ2 1067 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 TAS1R2Q8TE23 839 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 PIK3R5Q8WYR1 880 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 TAF4BQ92750 862 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 B3GALT6Q96L58 329 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 MRPL17Q9NRX2 175 aaKnown RBP16.15■□□□□ 0.18
HSPG2-201ENST00000374673 FANCLQ9NW38 375 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 COQ4Q9Y3A0 265 aa16.15■□□□□ 0.18
HSPG2-201ENST00000374673 C2orf71A6NGG8 1288 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 CYB561D2O14569 222 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 CSPG5O95196 566 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 AFPP02771 609 aaKnown RBP16.14■□□□□ 0.17
HSPG2-201ENST00000374673 CYP11A1P05108 521 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 ODC1P11926 461 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 IGFBP4P22692 258 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 MTIF2P46199 727 aaKnown RBP16.14■□□□□ 0.17
HSPG2-201ENST00000374673 ZNF445P59923 1031 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 MRPL58Q14197 206 aaKnown RBP16.14■□□□□ 0.17
HSPG2-201ENST00000374673 MAN2A1Q16706 1144 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 SGSM1Q2NKQ1 1148 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 ZNF699Q32M78 642 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 HSP90AA4PQ58FG1 418 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 ANKS3Q6ZW76 656 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 DPH6Q7L8W6 267 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 MRPL43Q8N983 215 aaKnown RBP16.14■□□□□ 0.17
HSPG2-201ENST00000374673 FBXL13Q8NEE6 735 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 LNX1Q8TBB1 728 aaPredicted RBP16.14■□□□□ 0.17
HSPG2-201ENST00000374673 AUTS2Q8WXX7 1259 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 RIN2Q8WYP3 895 aaPredicted RBP16.14■□□□□ 0.17
HSPG2-201ENST00000374673 HSD3B7Q9H2F3 369 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 NSUN3Q9H649 340 aaKnown RBP16.14■□□□□ 0.17
HSPG2-201ENST00000374673 RXFP1Q9HBX9 757 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.14■□□□□ 0.17
HSPG2-201ENST00000374673 PCDHGC5Q9Y5F6 944 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 SNX9Q9Y5X1 595 aa16.14■□□□□ 0.17
HSPG2-201ENST00000374673 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms