RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CITO14578 2027 aa20.89■□□□□ 0.93
HDAC1-201ENST00000373548 ZNF865P0CJ78 1059 aaPredicted RBP20.89■□□□□ 0.93
HDAC1-201ENST00000373548 PTP4A2Q12974 167 aa20.89■□□□□ 0.93
HDAC1-201ENST00000373548 IRF5Q13568 498 aa20.89■□□□□ 0.93
HDAC1-201ENST00000373548 OLFML2BQ68BL8 750 aa20.89■□□□□ 0.93
HDAC1-201ENST00000373548 ADAT2Q7Z6V5 191 aaKnown RBP20.89■□□□□ 0.93
HDAC1-201ENST00000373548 ZNF410Q86VK4 478 aa20.89■□□□□ 0.93
HDAC1-201ENST00000373548 LENG1Q96BZ8 264 aaPredicted RBP20.89■□□□□ 0.93
HDAC1-201ENST00000373548 ERVK-5Q9HDB9 667 aa20.89■□□□□ 0.93
HDAC1-201ENST00000373548 POLIQ9UNA4 740 aa20.89■□□□□ 0.93
HDAC1-201ENST00000373548 RRN3P2A6NIE6 340 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 POU5F1Q01860 360 aaKnown RBP20.88■□□□□ 0.93
HDAC1-201ENST00000373548 CLUL1Q15846 466 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 CCL14Q16627 93 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 SLC10A6Q3KNW5 377 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 ZNF394Q53GI3 561 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 CHADLQ6NUI6 762 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 USP6NLQ92738 828 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 KAT2BQ92831 832 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 VCPIP1Q96JH7 1222 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 ADAM22Q9P0K1 906 aa20.88■□□□□ 0.93
HDAC1-201ENST00000373548 ERLIN2O94905 339 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 F2P00734 622 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 KRT19P08727 400 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 PYGMP11217 842 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 BRD2P25440 801 aaKnown RBP20.87■□□□□ 0.93
HDAC1-201ENST00000373548 AARSP49588 968 aaKnown RBP eCLIP20.87■□□□□ 0.93
HDAC1-201ENST00000373548 IRX5P78411 483 aaPredicted RBP20.87■□□□□ 0.93
HDAC1-201ENST00000373548 LIN9Q5TKA1 542 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 MMS22LQ6ZRQ5 1243 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 PPP1R13LQ8WUF5 828 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 ASB7Q9H672 318 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 NXF1Q9UBU9 619 aaKnown RBP20.87■□□□□ 0.93
HDAC1-201ENST00000373548 A0A1B0GUA9 196 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 FAM153BP0C7A2 387 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 CYP2C19P33261 490 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 KIZQ2M2Z5 673 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 FAM153CQ494X1 144 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 C17orf99Q6UX52 265 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 TLK2Q86UE8 772 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 CXorf38Q8TB03 319 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 CCDC102AQ96A19 550 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 ADAMTS10Q9H324 1103 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 FAM153AQ9UHL3 310 aa20.87■□□□□ 0.93
HDAC1-201ENST00000373548 SMIM10L2AP0DMW4 78 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 SMIM10L2BP0DMW5 78 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 FGFR4P22455 802 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 C1QBPQ07021 282 aaKnown RBP20.86■□□□□ 0.93
HDAC1-201ENST00000373548 NNTQ13423 1086 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 KYAT1Q16773 422 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 SEL1L2Q5TEA6 688 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 PPP1R2P3Q6NXS1 205 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 CCDC26Q8TAB7 109 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 BCO2Q9BYV7 579 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 FAM49AQ9H0Q0 323 aaPredicted RBP20.86■□□□□ 0.93
HDAC1-201ENST00000373548 GOLGA6L10A0A0M3HER8 536 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 TTI1O43156 1089 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 ITGB3P05106 788 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 TERF2Q15554 542 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 ZNF667Q5HYK9 610 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 PLEKHA7Q6IQ23 1121 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 MAATS1Q7Z4T9 603 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 IFNL1Q8IU54 200 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 TSEN2Q8NCE0 465 aaKnown RBP20.86■□□□□ 0.93
HDAC1-201ENST00000373548 TFAP2BQ92481 460 aa20.86■□□□□ 0.93
HDAC1-201ENST00000373548 CELF4Q9BZC1 486 aaKnown RBP20.86■□□□□ 0.93
HDAC1-201ENST00000373548 TRIP11Q15643 1979 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 MYO1FO00160 1098 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 MMP8P22894 467 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 RAP1GAPP47736 663 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 RWDD2BP57060 319 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 TMEM62Q0P6H9 643 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 MAMLD1Q13495 774 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 PPP2R5EQ16537 467 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 SMYD5Q6GMV2 418 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 RGMBQ6NW40 437 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 SAPCD2Q86UD0 394 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 ZDHHC14Q8IZN3 488 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 EIF1ADQ8N9N8 165 aaKnown RBP20.85■□□□□ 0.93
HDAC1-201ENST00000373548 NRCAMQ92823 1304 aa20.85■□□□□ 0.93
HDAC1-201ENST00000373548 LSM8O95777 96 aaKnown RBP20.84■□□□□ 0.93
HDAC1-201ENST00000373548 HSPA6P17066 643 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 CYP2B6P20813 491 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 ECHS1P30084 290 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 YWHAEP62258 255 aaKnown RBP20.84■□□□□ 0.93
HDAC1-201ENST00000373548 CUL1Q13616 776 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 KCTD19Q17RG1 926 aaPredicted RBP20.84■□□□□ 0.93
HDAC1-201ENST00000373548 WDR72Q3MJ13 1102 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 ADPGKQ9BRR6 497 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 SDCBP2Q9H190 292 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 MED4Q9NPJ6 270 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 TRIP12Q14669 1992 aaPredicted RBP20.84■□□□□ 0.93
HDAC1-201ENST00000373548 MBLAC1A4D2B0 266 aaPredicted RBP20.84■□□□□ 0.93
HDAC1-201ENST00000373548 AGPSO00116 658 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 GPR32O75388 356 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 SYF2O95926 243 aaKnown RBP20.84■□□□□ 0.93
HDAC1-201ENST00000373548 SLC1A1P43005 524 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 HIC1Q14526 733 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 HSP90B2PQ58FF3 399 aa20.84■□□□□ 0.93
HDAC1-201ENST00000373548 DDX42Q86XP3 938 aaKnown RBP eCLIP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms