RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 KNOP1Q1ED39 458 aaKnown RBP22.04■■□□□ 1.12
SYNC-201ENST00000373484 XKR4Q5GH76 650 aa22.04■■□□□ 1.12
SYNC-201ENST00000373484 ZBTB41Q5SVQ8 909 aa22.04■■□□□ 1.12
SYNC-201ENST00000373484 ZNF280BQ86YH2 543 aa22.04■■□□□ 1.12
SYNC-201ENST00000373484 CCDC170Q8IYT3 715 aa22.04■■□□□ 1.12
SYNC-201ENST00000373484 SNX27Q96L92 541 aa22.04■■□□□ 1.12
SYNC-201ENST00000373484 PLAGL2Q9UPG8 496 aa22.04■■□□□ 1.12
SYNC-201ENST00000373484 LUC7L2Q9Y383 392 aaKnown RBP22.04■■□□□ 1.12
SYNC-201ENST00000373484 MEFVO15553 781 aaPredicted RBP22.03■■□□□ 1.12
SYNC-201ENST00000373484 DDHD2O94830 711 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 CDK17Q00537 523 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 ADSSL1Q8N142 457 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 P2RX5Q93086 422 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 CBWD1Q9BRT8 395 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 PRDM12Q9H4Q4 367 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 MTMR10Q9NXD2 777 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 CPSF3Q9UKF6 684 aaKnown RBP22.03■■□□□ 1.12
SYNC-201ENST00000373484 PCDHB12Q9Y5F1 795 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 MYO1CO00159 1063 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 ZC3H11AO75152 810 aaKnown RBP eCLIP22.03■■□□□ 1.12
SYNC-201ENST00000373484 SNRPFP62306 86 aaKnown RBP22.03■■□□□ 1.12
SYNC-201ENST00000373484 DSC1Q08554 894 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 STIM1Q13586 685 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 SLC10A6Q3KNW5 377 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 IQCEQ6IPM2 695 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 KCNT2Q6UVM3 1135 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 SMYD4Q8IYR2 804 aaPredicted RBP22.03■■□□□ 1.12
SYNC-201ENST00000373484 FAM193BQ96PV7 902 aaPredicted RBP22.03■■□□□ 1.12
SYNC-201ENST00000373484 DNAJB4Q9UDY4 337 aa22.03■■□□□ 1.12
SYNC-201ENST00000373484 A0A0U1RQJ8 604 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 H3BNC9 293 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 RHOXF2BP0C7M4 288 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 CXCL8P10145 99 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 BCAR1P56945 870 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 UBXN1Q04323 297 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 ITIH3Q06033 890 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 ATRIPQ8WXE1 791 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 ZNF558Q96NG5 402 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 GUCD1Q96NT3 240 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 RHOXF2Q9BQY4 288 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 C11orf84Q9BUA3 381 aaPredicted RBP22.02■■□□□ 1.12
SYNC-201ENST00000373484 VPS16Q9H269 839 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 AGPAT3Q9NRZ7 376 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 TAB2Q9NYJ8 693 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 CNTN3Q9P232 1028 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 FAN1Q9Y2M0 1017 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 REXO2Q9Y3B8 237 aaKnown RBP22.02■■□□□ 1.12
SYNC-201ENST00000373484 SAR1BQ9Y6B6 198 aa22.02■■□□□ 1.12
SYNC-201ENST00000373484 RFXAPO00287 272 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 THP07101 528 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 CYLC1P35663 651 aaPredicted RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 PBX3P40426 434 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 ACOT2P49753 483 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 NAB2Q15742 525 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 ENOX2Q16206 610 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 CRELD2Q6UXH1 353 aaPredicted RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 HS2ST1Q7LGA3 356 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 COLGALT2Q8IYK4 626 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 GUF1Q8N442 669 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 GOLGA6L1Q8N7Z2 621 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 TMEM175Q9BSA9 504 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 KCTD10Q9H3F6 313 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 PLEKHA5Q9HAU0 1116 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 SMIM28A0A1B0GU29 152 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 TTC26A0AVF1 554 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 CARNS1A5YM72 827 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 KIAA0391O15091 583 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 KRT86O43790 486 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 LDHAP00338 332 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 ADRB2P07550 413 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 GALTP07902 379 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 ALDH7A1P49419 539 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 POU5F1Q01860 360 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 FIGNQ5HY92 759 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 GLRA4Q5JXX5 417 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 KLHL23Q8NBE8 558 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 ZSWIM2Q8NEG5 633 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 GDPD5Q8WTR4 605 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 PPP1R10Q96QC0 940 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 PCIF1Q9H4Z3 704 aa22.01■■□□□ 1.11
SYNC-201ENST00000373484 RPF1Q9H9Y2 349 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 RRP15Q9Y3B9 282 aaKnown RBP22.01■■□□□ 1.11
SYNC-201ENST00000373484 LPXNO60711 386 aa22■■□□□ 1.11
SYNC-201ENST00000373484 KCNE1P15382 129 aa22■■□□□ 1.11
SYNC-201ENST00000373484 GPM6BQ13491 265 aa22■■□□□ 1.11
SYNC-201ENST00000373484 COBLL1Q53SF7 1204 aa22■■□□□ 1.11
SYNC-201ENST00000373484 IRF2BP1Q8IU81 584 aa22■■□□□ 1.11
SYNC-201ENST00000373484 C12orf56Q8IXR9 622 aa22■■□□□ 1.11
SYNC-201ENST00000373484 NOA1Q8NC60 698 aaKnown RBP22■■□□□ 1.11
SYNC-201ENST00000373484 SAAL1Q96ER3 474 aa22■■□□□ 1.11
SYNC-201ENST00000373484 DHTKD1Q96HY7 919 aaPredicted RBP22■■□□□ 1.11
SYNC-201ENST00000373484 ZMAT2Q96NC0 199 aaKnown RBP22■■□□□ 1.11
SYNC-201ENST00000373484 CDX2Q99626 313 aaPredicted RBP22■■□□□ 1.11
SYNC-201ENST00000373484 MAPK8IP1Q9UQF2 711 aa22■■□□□ 1.11
SYNC-201ENST00000373484 EIF3CLB5ME19 914 aaKnown RBP21.99■■□□□ 1.11
SYNC-201ENST00000373484 RNF225M0QZC1 329 aaPredicted RBP21.99■■□□□ 1.11
SYNC-201ENST00000373484 PPM1AP35813 382 aa21.99■■□□□ 1.11
SYNC-201ENST00000373484 PRCPP42785 496 aa21.99■■□□□ 1.11
SYNC-201ENST00000373484 SLC11A1P49279 550 aa21.99■■□□□ 1.11
SYNC-201ENST00000373484 TUSC3Q13454 348 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms