RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 GOLGA8RI6L899 631 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 NDUFB10O96000 172 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 HSD17B3P37058 310 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 CDK17Q00537 523 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 SPP2Q13103 211 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 KIAA1841Q6NSI8 718 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 RFX8Q6ZV50 586 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 RBBP8NLQ8NC74 664 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-202ENST00000373474 SLC10A4Q96EP9 437 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 MCEEQ96PE7 176 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 MOV10L1Q9BXT6 1211 aaKnown RBP14.91□□□□□ -0.02
LMX1B-202ENST00000373474 MRGBPQ9NV56 204 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 MPP6Q9NZW5 540 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 CD163L1Q9NR16 1453 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 DIP2BQ9P265 1576 aa14.91□□□□□ -0.02
LMX1B-202ENST00000373474 ZNF677Q86XU0 584 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 KIF12Q96FN5 646 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 CCT8L1PA6NM43 557 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 VCAM1P19320 739 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 COILP38432 576 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-202ENST00000373474 HSPA13P48723 471 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 KIRREL3Q8IZU9 778 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 NDUFAF2Q8N183 169 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 C3orf20Q8ND61 904 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 PARD3BQ8TEW8 1205 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 KRT16P08779 473 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 LCP1P13796 627 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 PRLRP16471 622 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 ITGA8P53708 1063 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 RUNX1T1Q06455 604 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 CDC42EP5Q6NZY7 148 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 MTHFD1LQ6UB35 978 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 PLEKHM3Q6ZWE6 761 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 KCNK16Q96T55 309 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 GEMIN8Q9NWZ8 242 aaKnown RBP14.9□□□□□ -0.02
LMX1B-202ENST00000373474 UTP6Q9NYH9 597 aaKnown RBP14.9□□□□□ -0.02
LMX1B-202ENST00000373474 TMEM120BA0PK00 339 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 KCNQ2O43526 872 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 TBC1D4O60343 1298 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 ACADSP16219 412 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 SERPINB9P50453 376 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 GRB10Q13322 594 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 ADNPQ9H2P0 1102 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 ALG6Q9Y672 507 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 SLIT1O75093 1534 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 AP5Z1O43299 807 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 RASSF9O75901 435 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 PLEKP08567 350 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-202ENST00000373474 C4BPBP20851 252 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 MAGEA4P43358 317 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 ADRM1Q16186 407 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 XKR3Q5GH77 459 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 HHIPL2Q6UWX4 724 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-202ENST00000373474 DDHD1Q8NEL9 900 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 CNGB3Q9NQW8 809 aa14.9□□□□□ -0.02
LMX1B-202ENST00000373474 COL3A1P02461 1466 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-202ENST00000373474 TOB1P50616 345 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-202ENST00000373474 HERVK_113P62684 666 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 ZNF200P98182 395 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-202ENST00000373474 STILQ15468 1287 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 DEPDC1Q5TB30 811 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 PAPD7Q5XG87 772 aaKnown RBP14.89□□□□□ -0.03
LMX1B-202ENST00000373474 TWF2Q6IBS0 349 aaKnown RBP14.89□□□□□ -0.03
LMX1B-202ENST00000373474 KCNV1Q6PIU1 500 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 HDDC2Q7Z4H3 204 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 ZNF560Q96MR9 790 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 HACD3Q9P035 362 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 ABCE1P61221 599 aaKnown RBP14.89□□□□□ -0.03
LMX1B-202ENST00000373474 NCOA4Q13772 614 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 SGSM1Q2NKQ1 1148 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 ACAP3Q96P50 834 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 EPAS1Q99814 870 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 OLFML3Q9NRN5 406 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 PLAGL2Q9UPG8 496 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 SMAPO00193 183 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 PDE5AO76074 875 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 COPB2P35606 906 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 SULT1E1P49888 294 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 BLVRAP53004 296 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 IMPG1Q17R60 797 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 STRIP1Q5VSL9 837 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 TAGAPQ8N103 731 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 C4orf33Q8N1A6 199 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 HIC2Q96JB3 615 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 DEPDC5O75140 1603 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 AP3B1O00203 1094 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 PJA2O43164 708 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 ACOT2P49753 483 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 RNF149Q8NC42 400 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 C9orf72Q96LT7 481 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 SLC40A1Q9NP59 571 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 PRR12Q9ULL5 1215 aa14.89□□□□□ -0.03
LMX1B-202ENST00000373474 MTO1Q9Y2Z2 717 aaKnown RBP14.89□□□□□ -0.03
LMX1B-202ENST00000373474 MAGEA13PA6NCF6 341 aa14.88□□□□□ -0.03
LMX1B-202ENST00000373474 KDSRQ06136 332 aa14.88□□□□□ -0.03
LMX1B-202ENST00000373474 FASTKD1Q53R41 847 aaKnown RBP14.88□□□□□ -0.03
LMX1B-202ENST00000373474 GJB7Q6PEY0 223 aa14.88□□□□□ -0.03
LMX1B-202ENST00000373474 BARGINQ6ZT62 677 aa14.88□□□□□ -0.03
LMX1B-202ENST00000373474 DDI1Q8WTU0 396 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms