RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 RANBP17Q9H2T7 1088 aaKnown RBP25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 HLA-DRAP01903 254 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 BARGINQ6ZT62 677 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 OVGP1Q12889 678 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 MAPRE2Q15555 327 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 RABL6Q3YEC7 729 aaPredicted RBP25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 MROH9Q5TGP6 573 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 CDR2LQ86X02 465 aaPredicted RBP25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 SMG5Q9UPR3 1016 aaKnown RBP25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 CNTNAP5Q8WYK1 1306 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 FAXCQ5TGI0 409 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 USP38Q8NB14 1042 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 PIDD1Q9HB75 910 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 TUBE1Q9UJT0 475 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 MAP3K6O95382 1288 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 MYL2P10916 166 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 HDAC4P56524 1084 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 SLC29A2Q14542 456 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 GOLGA7BQ2TAP0 167 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 DDX53Q86TM3 631 aaKnown RBP25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 C11orf74Q86VG3 221 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 SPATA18Q8TC71 538 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 SEPT8Q92599 483 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 PNKPQ96T60 521 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 UVRAGQ9P2Y5 699 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 DUSP10Q9Y6W6 482 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 ZC3H4Q9UPT8 1303 aaKnown RBP25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 CHI3L2Q15782 390 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 AMHR2Q16671 573 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 GPAT2Q6NUI2 795 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 TNIP3Q96KP6 325 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 TEX12Q9BXU0 123 aa25.08■■□□□ 1.61
RAPGEF1-203ENST00000372195 C6orf10Q5SRN2 563 aa25.08■■□□□ 1.6
RAPGEF1-203ENST00000372195 KIAA2013Q8IYS2 634 aa25.08■■□□□ 1.6
RAPGEF1-203ENST00000372195 PRR12Q9ULL5 1215 aa25.08■■□□□ 1.6
RAPGEF1-203ENST00000372195 IGF2BP3O00425 579 aaKnown RBP eCLIP25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 ZBTB39O15060 712 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 TARSP26639 723 aaKnown RBP25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 EFNA5P52803 228 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 LRRC74AQ0VAA2 488 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 SLC7A14Q8TBB6 771 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 CASKIN2Q8WXE0 1202 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 THAP2Q9H0W7 228 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 PDS5AQ29RF7 1337 aaKnown RBP25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 LOC100653049A0A140TA62 436 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 KRT34O76011 436 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 NEK2P51955 445 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 SGO1Q5FBB7 561 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 ALG6Q9Y672 507 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 AFF2P51816 1311 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 PRKCEQ02156 737 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 SSU72P8A0A1W2PR75 194 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 CLEC4FQ8N1N0 589 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 EFHBQ8N7U6 833 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 OSBPL8Q9BZF1 889 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 VIPAS39Q9H9C1 493 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 USP42Q9H9J4 1324 aaKnown RBP25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 PSMD14O00487 310 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 MTHFD1LQ6UB35 978 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 RUBCNQ92622 972 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 TRIM54Q9BYV2 358 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 ZNF212Q9UDV6 495 aa25.07■■□□□ 1.6
RAPGEF1-203ENST00000372195 IPMKQ8NFU5 416 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 FAM95CA0A1B0GW59 222 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 B2RBV5 119 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 PPP3CCP48454 512 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 ADCY3O60266 1144 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 CD44P16070 742 aaKnown RBP25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 KRT72Q14CN4 511 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 KLHDC7AQ5VTJ3 777 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 ASAP3Q8TDY4 903 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 ZC3H15Q8WU90 426 aaKnown RBP25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 MRPL1Q9BYD6 325 aaKnown RBP25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 JMJD4Q9H9V9 463 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 ASMTLO95671 621 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 PYGLP06737 847 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 PIGHQ14442 188 aaPredicted RBP25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 INPP5AQ14642 412 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 TTC39BQ5VTQ0 682 aaPredicted RBP25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 DNAAF5Q86Y56 855 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 AGBL1Q96MI9 1066 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 SLC40A1Q9NP59 571 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 CDYLQ9Y232 598 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 SPDYE5A6NIY4 337 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 SLC37A4O43826 429 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 RASA1P20936 1047 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 ATP6V1E1P36543 226 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 SPDYE7PQ495Y7 208 aa25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 ACBD5Q5T8D3 534 aaPredicted RBP25.06■■□□□ 1.6
RAPGEF1-203ENST00000372195 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 ARHGEF9O43307 516 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 TTC23LQ6PF05 361 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 PLEKHG2Q9H7P9 1386 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 ERVK-24P63145 666 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 AGBL2Q5U5Z8 902 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 ZNF555Q8NEP9 628 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 EME1Q96AY2 570 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 HERC5Q9UII4 1024 aaKnown RBP25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 HPS5Q9UPZ3 1129 aa25.05■■□□□ 1.6
RAPGEF1-203ENST00000372195 XPO1O14980 1071 aaKnown RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms