RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 AARSP49588 968 aaKnown RBP eCLIP17.17■□□□□ 0.34
PFDN4-201ENST00000371419 TAF6P49848 677 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 DSG1Q02413 1049 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 KIAA0319Q5VV43 1072 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 FRMD5Q7Z6J6 570 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 GPR65Q8IYL9 337 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 MICALL1Q8N3F8 863 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 AUTS2Q8WXX7 1259 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 PPP2R3CQ969Q6 453 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 B3GALT6Q96L58 329 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 DNAJC25Q9H1X3 360 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 METTL14Q9HCE5 456 aaKnown RBP17.17■□□□□ 0.34
PFDN4-201ENST00000371419 ARMCX3Q9UH62 379 aaPredicted RBP17.17■□□□□ 0.34
PFDN4-201ENST00000371419 SIX4Q9UIU6 781 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 STXBP5LQ9Y2K9 1186 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 IRAK3Q9Y616 596 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.16■□□□□ 0.34
PFDN4-201ENST00000371419 C2orf71A6NGG8 1288 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 HIDE1A8MVS5 230 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 C2CD2LO14523 706 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 SYN3O14994 580 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 PHACTR2O75167 634 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 TRIM49P0CI25 452 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 TRIM49CP0CI26 452 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 FGFR3P22607 806 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 PTPN14Q15678 1187 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 TPD52L1Q16890 204 aaPredicted RBP17.16■□□□□ 0.34
PFDN4-201ENST00000371419 SV2CQ496J9 727 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 CCDC40Q4G0X9 1142 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 C1orf220Q5T0J3 134 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 DSTYKQ6XUX3 929 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 CEP57Q86XR8 500 aa17.16■□□□□ 0.34
PFDN4-201ENST00000371419 GOLGA6L19H0YKK7 550 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 M0QZQ0 153 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 SPTLC1O15269 473 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 STX10O60499 249 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 LILRB3O75022 631 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 ADCY5O95622 1261 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 C4BPAP04003 597 aaKnown RBP17.15■□□□□ 0.34
PFDN4-201ENST00000371419 TKTP29401 623 aaKnown RBP17.15■□□□□ 0.34
PFDN4-201ENST00000371419 MYO1EQ12965 1108 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 BIRC3Q13489 604 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 TRPC3Q13507 836 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 TCEAL5Q5H9L2 206 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 RTP2Q5QGT7 225 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 TDRD10Q5VZ19 366 aaKnown RBP17.15■□□□□ 0.34
PFDN4-201ENST00000371419 PDXDC1Q6P996 788 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 APPL2Q8NEU8 664 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
PFDN4-201ENST00000371419 PIK3R5Q8WYR1 880 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 PCDHB8Q9UN66 801 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 SCN1AP35498 2009 aa17.15■□□□□ 0.34
PFDN4-201ENST00000371419 ATG2AQ2TAZ0 1938 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 ARHGEF37A1IGU5 675 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 KPNA7A9QM74 516 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 CST3P01034 146 aaPredicted RBP17.14■□□□□ 0.33
PFDN4-201ENST00000371419 GTF2H1P32780 548 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 GCLMP48507 274 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 PPP3CAQ08209 521 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 ZACNQ401N2 412 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
PFDN4-201ENST00000371419 TCERG1LQ5VWI1 586 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 SCARA3Q6AZY7 606 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 SV2AQ7L0J3 742 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 HPDLQ96IR7 371 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 SENP8Q96LD8 212 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 EMILIN2Q9BXX0 1053 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 TLE6Q9H808 572 aa17.14■□□□□ 0.33
PFDN4-201ENST00000371419 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.14■□□□□ 0.33
PFDN4-201ENST00000371419 MARSP56192 900 aaKnown RBP17.13■□□□□ 0.33
PFDN4-201ENST00000371419 CREMQ03060 361 aa17.13■□□□□ 0.33
PFDN4-201ENST00000371419 CCDC85BQ15834 202 aaPredicted RBP17.13■□□□□ 0.33
PFDN4-201ENST00000371419 C15orf39Q6ZRI6 1047 aa17.13■□□□□ 0.33
PFDN4-201ENST00000371419 C11orf57Q6ZUT1 292 aaPredicted RBP17.13■□□□□ 0.33
PFDN4-201ENST00000371419 ADGRD2Q7Z7M1 963 aa17.13■□□□□ 0.33
PFDN4-201ENST00000371419 RBM23Q86U06 439 aaKnown RBP17.13■□□□□ 0.33
PFDN4-201ENST00000371419 LUZP1Q86V48 1076 aa17.13■□□□□ 0.33
PFDN4-201ENST00000371419 LNX1Q8TBB1 728 aaPredicted RBP17.13■□□□□ 0.33
PFDN4-201ENST00000371419 CDCA3Q99618 268 aaPredicted RBP17.13■□□□□ 0.33
PFDN4-201ENST00000371419 MMRN2Q9H8L6 949 aa17.13■□□□□ 0.33
PFDN4-201ENST00000371419 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
PFDN4-201ENST00000371419 TMEM8AQ9HCN3 771 aa17.13■□□□□ 0.33
PFDN4-201ENST00000371419 VWA8A3KMH1 1905 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 BECN2A8MW95 431 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 CYB561D2O14569 222 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 CNPP09543 421 aaKnown RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 ODC1P11926 461 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 ATICP31939 592 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 NRIP1P48552 1158 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 NCOA4Q13772 614 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 IQCB1Q15051 598 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 PSMD5Q16401 504 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 DUSP6Q16828 381 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 VARS2Q5ST30 1063 aaKnown RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 PRSS55Q6UWB4 352 aaPredicted RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 ANKS3Q6ZW76 656 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 MAFAQ8NHW3 353 aaPredicted RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 ENOX1Q8TC92 643 aaKnown RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 PPM1EQ8WY54 764 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms