RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 M0R3G1 203 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 GDF11O95390 407 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 C16orf89Q6UX73 402 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 LPCAT2Q7L5N7 544 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 ZNF571Q7Z3V5 609 aaPredicted RBP13.31□□□□□ -0.28
GPC4-201ENST00000370828 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 PRPF18Q99633 342 aaKnown RBP13.31□□□□□ -0.28
GPC4-201ENST00000370828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
GPC4-201ENST00000370828 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 TPST1O60507 370 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 NUDT2P50583 147 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 PDIA5Q14554 519 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 ANO4Q32M45 955 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 TRMT5Q32P41 509 aaKnown RBP13.31□□□□□ -0.28
GPC4-201ENST00000370828 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 MIGA2Q7L4E1 593 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 HEXIM2Q96MH2 286 aaKnown RBP13.31□□□□□ -0.28
GPC4-201ENST00000370828 FOXP3Q9BZS1 431 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 CLIC5Q9NZA1 410 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 TRIM49D1C9J1S8 452 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 USP17L10C9JJH3 530 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 SHBGP04278 402 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 APRTP07741 180 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 OSBPP22059 807 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 MTTPP55157 894 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 BCAR1P56945 870 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 ORC2Q13416 577 aaPredicted RBP13.31□□□□□ -0.28
GPC4-201ENST00000370828 NT5DC1Q5TFE4 455 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 HEATR4Q86WZ0 1026 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 PGM2Q96G03 612 aa13.31□□□□□ -0.28
GPC4-201ENST00000370828 IPO11Q9UI26 975 aaKnown RBP13.31□□□□□ -0.28
GPC4-201ENST00000370828 A0A1B0GW55 424 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 DUX4L2P0CJ85 424 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 DUX4L3P0CJ86 424 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 DUX4L4P0CJ87 422 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 DUX4L5P0CJ88 424 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 DUX4L6P0CJ89 424 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 DUX4L7P0CJ90 424 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 TAC1P20366 129 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 EDRF1Q3B7T1 1238 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 INPP5DQ92835 1189 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 CEP95Q96GE4 821 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 CCDC17Q96LX7 622 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 DUX4Q9UBX2 424 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 ZBTB39O15060 712 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 SNRPAP09012 282 aaKnown RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 ABL2P42684 1182 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 SESN2P58004 480 aaPredicted RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 PTENP60484 403 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 EFHC1Q5JVL4 640 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 LAYNQ6UX15 382 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 HORMAD1Q86X24 394 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 TMEM139Q8IV31 216 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 EFHD2Q96C19 240 aaPredicted RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 PPCSQ9HAB8 311 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 RAB6BQ9NRW1 208 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
GPC4-201ENST00000370828 TEKT2Q9UIF3 430 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 ZMYND8Q9ULU4 1186 aaPredicted RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 SH3GLB1Q9Y371 365 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 MYO3BQ8WXR4 1341 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 A0A087X0B3 334 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 ARPC4-TTLL3A0A0A6YYG9 625 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 RBM47A0AV96 593 aaKnown RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 ZBTB5O15062 677 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 FKBP6O75344 327 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 ATP6V1C1P21283 382 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 SKA1Q96BD8 255 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 ARMCX1Q9P291 453 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 KLHL8Q9P2G9 620 aaPredicted RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 SEPT3Q9UH03 358 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 FNDC3AQ9Y2H6 1198 aaKnown RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 A8MUI8 341 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 HNRNPRO43390 633 aaKnown RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 UNC5CO95185 931 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 AQP5P55064 265 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 LMBRD2Q68DH5 695 aaPredicted RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 RNF135Q8IUD6 432 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 SIX6OS1Q8N1H7 587 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 SUN5Q8TC36 379 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 NDNQ99608 321 aa13.3□□□□□ -0.28
GPC4-201ENST00000370828 CNOT7Q9UIV1 285 aaKnown RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 CAB39Q9Y376 341 aaPredicted RBP13.3□□□□□ -0.28
GPC4-201ENST00000370828 SLC16A3O15427 465 aaKnown RBP13.29□□□□□ -0.28
GPC4-201ENST00000370828 KRT6AP02538 564 aa13.29□□□□□ -0.28
GPC4-201ENST00000370828 KRT6BP04259 564 aa13.29□□□□□ -0.28
GPC4-201ENST00000370828 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
GPC4-201ENST00000370828 RPL21P46778 160 aaKnown RBP13.29□□□□□ -0.28
GPC4-201ENST00000370828 KRT6CP48668 564 aa13.29□□□□□ -0.28
GPC4-201ENST00000370828 XRCC4Q13426 336 aa13.29□□□□□ -0.28
GPC4-201ENST00000370828 DCTN2Q13561 401 aaKnown RBP13.29□□□□□ -0.28
GPC4-201ENST00000370828 TRADDQ15628 312 aa13.29□□□□□ -0.28
GPC4-201ENST00000370828 RNF220Q5VTB9 566 aa13.29□□□□□ -0.28
GPC4-201ENST00000370828 CWF19L1Q69YN2 538 aaKnown RBP13.29□□□□□ -0.28
GPC4-201ENST00000370828 ANKRD13AQ8IZ07 590 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms