RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 PPARAQ07869 468 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 COX10Q12887 443 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 KRT72Q14CN4 511 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 SART3Q15020 963 aaKnown RBP4.43□□□□□ -1.7
LRRC39-203ENST00000370138 UBE3CQ15386 1083 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 TERF2Q15554 542 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 MUM1Q2TAK8 710 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 ALFQ53S48 1182 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 GPR158Q5T848 1215 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 HECTD2Q5U5R9 776 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 ANKS6Q68DC2 871 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 BTNL9Q6UXG8 535 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 DOK3Q7L591 496 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 THNSL2Q86YJ6 484 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 ZNF610Q8N9Z0 462 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 OR2W6PQ8NHA6 318 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 GABPB2Q8TAK5 448 aaPredicted RBP4.43□□□□□ -1.7
LRRC39-203ENST00000370138 LEO1Q8WVC0 666 aaPredicted RBP4.43□□□□□ -1.7
LRRC39-203ENST00000370138 TIGD1Q96MW7 591 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 GSDMAQ96QA5 445 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 SPAG5Q96R06 1193 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 SLC46A2Q9BY10 475 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 TRPM5Q9NZQ8 1165 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 CPSF2Q9P2I0 782 aaKnown RBP4.43□□□□□ -1.7
LRRC39-203ENST00000370138 CLIP2Q9UDT6 1046 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 PGAP2Q9UHJ9 254 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 INTUQ9ULD6 942 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 CHST2Q9Y4C5 530 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 TNFRSF18Q9Y5U5 241 aa4.43□□□□□ -1.7
LRRC39-203ENST00000370138 ZMYM3Q14202 1370 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 PRRT4C9JH25 899 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 B3GALT2O43825 422 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 MTRF1O75570 445 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 RHOBTB3O94955 611 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 OAS2P29728 719 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 ADCYAP1R1P41586 468 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 TNNT3P45378 269 aaPredicted RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 MANFP55145 182 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 GEMIN4P57678 1058 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 PHC1P78364 1004 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 ZBED6P86452 979 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 TRAF1Q13077 416 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 PRPF4BQ13523 1007 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 TRIM25Q14258 630 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 HLTFQ14527 1009 aaKnown RBP eCLIP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 WTAPQ15007 396 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 SPECC1Q5M775 1068 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 C10orf62Q5T681 223 aaPredicted RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 AGAP9Q5VTM2 703 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 ARMC3Q5W041 872 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 TSHZ3Q63HK5 1081 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 LMBR1LQ6UX01 489 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 Q6YL49 198 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 RNF180Q86T96 592 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 SLC41A1Q8IVJ1 513 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 TBC1D20Q96BZ9 403 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 MYEOVQ96EZ4 313 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 PPCSQ9HAB8 311 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 AKIP1Q9NQ31 210 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 ZNHIT6Q9NWK9 470 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 TRMT1Q9NXH9 659 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 QPCTLQ9NXS2 382 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 SEL1LQ9UBV2 794 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 ZMAT5Q9UDW3 170 aaKnown RBP4.42□□□□□ -1.7
LRRC39-203ENST00000370138 PRSS50Q9UI38 385 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 SUFUQ9UMX1 484 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 NUMBLQ9Y6R0 609 aa4.42□□□□□ -1.7
LRRC39-203ENST00000370138 WRNQ14191 1432 aaPredicted RBP eCLIP4.42□□□□□ -1.71e-6■■■■■ 58.5
LRRC39-203ENST00000370138 TMEM200CA6NKL6 621 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 C19orf81C9J6K1 198 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 TMEM127O75204 238 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 KRT38O76015 456 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 CCNCP24863 283 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 LSP1P33241 339 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 KCNJ4P48050 445 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 LSSP48449 732 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 GPR15P49685 360 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 SNX16P57768 344 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 RNASE9P60153 205 aaKnown RBP4.41□□□□□ -1.7
LRRC39-203ENST00000370138 IL2P60568 153 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 IRX1P78414 480 aaPredicted RBP4.41□□□□□ -1.7
LRRC39-203ENST00000370138 OCRLQ01968 901 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 TOMM20Q15388 145 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 PTPN14Q15678 1187 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 PDCD2Q16342 344 aaPredicted RBP4.41□□□□□ -1.7
LRRC39-203ENST00000370138 GRAMD1BQ3KR37 738 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 HYIQ5T013 277 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 AP1ARQ63HQ0 302 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 ABHD15Q6UXT9 468 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 SYNE3Q6ZMZ3 975 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 GDF7Q7Z4P5 450 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 TRIM74Q86UV6 250 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 TRIM73Q86UV7 250 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 TEX9Q8N6V9 391 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 PPHLN1Q8NEY8 458 aaKnown RBP4.41□□□□□ -1.7
LRRC39-203ENST00000370138 NEK9Q8TD19 979 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 NTN5Q8WTR8 489 aaPredicted RBP4.41□□□□□ -1.7
LRRC39-203ENST00000370138 HDAC7Q8WUI4 952 aa4.41□□□□□ -1.7
LRRC39-203ENST00000370138 MAML1Q92585 1016 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms