RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 USP17L15C9J2P7 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L13C9JLJ4 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L11C9JVI0 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L18D6R9N7 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L22D6RA61 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L17D6RBQ6 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L19D6RCP7 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L20D6RJB6 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 F8W8V4 182 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 NDC80O14777 642 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 TBX10O75333 385 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 SGPL1O95470 568 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 MYBL1P10243 752 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 CA4P22748 312 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 ADSSP30520 456 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 GSTT1P30711 240 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 RPA3P35244 121 aaPredicted RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 FMO1Q01740 532 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 ADCY1Q08828 1119 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L24Q0WX57 530 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 SLC1A5Q15758 541 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 PRR16Q569H4 304 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 ATG4AQ8WYN0 398 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 BTBD6Q96KE9 485 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 IWS1Q96ST2 819 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 RBM15Q96T37 977 aaKnown RBP eCLIP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 KCND2Q9NZV8 630 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 TBC1D30Q9Y2I9 924 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 EMSYQ7Z589 1322 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 F5H6K3 240 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 GYG2O15488 501 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 LYNP07948 512 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 AKR1B1P15121 316 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 KLRC2P26717 231 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 SREBF1P36956 1147 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 RAP1GDS1P52306 607 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 KLF1Q13351 362 aaPredicted RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 RASA3Q14644 834 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 TRIP13Q15645 432 aaPredicted RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 PKN2Q16513 984 aaKnown RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 ZC2HC1CQ53FD0 456 aaPredicted RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 KIAA0825Q8IV33 1275 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 STKLD1Q8NE28 680 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 MCUR1Q96AQ8 359 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 SKA1Q96BD8 255 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 OPTNQ96CV9 577 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 PWWP2AQ96N64 755 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 OLFM3Q96PB7 478 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 HAPLN3Q96S86 360 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 STRA6Q9BX79 667 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 ASCC2Q9H1I8 757 aaPredicted RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 NPHS2Q9NP85 383 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 AVENQ9NQS1 362 aaPredicted RBP11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 KRT82Q9NSB4 513 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 ARL8BQ9NVJ2 186 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 PIM2Q9P1W9 311 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 ATXN10Q9UBB4 475 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 TMCO1Q9UM00 188 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 PHF24Q9UPV7 400 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 COMMD3-BMI1R4GMX3 469 aa11.13□□□□□ -0.63
LYSMD1-201ENST00000368908 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 MEIS2O14770 477 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 KRT15P19012 456 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 QRICH1Q2TAL8 776 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 WDR72Q3MJ13 1102 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 PABPC1LQ4VXU2 614 aaKnown RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 DPP8Q6V1X1 898 aaPredicted RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 FAM178BQ8IXR5 827 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 C12orf56Q8IXR9 622 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 RBM17Q96I25 401 aaKnown RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 FAM81BQ96LP2 452 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 UIMC1Q96RL1 719 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 CENPKQ9BS16 269 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 SPATA16Q9BXB7 569 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 PPP1R12CQ9BZL4 782 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 IKZF4Q9H2S9 585 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 PSMC3IPQ9P2W1 217 aaPredicted RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 LRRC37AA6NMS7 1700 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 MAGEC1O60732 1142 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 TGDSO95455 350 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 IL1BP01584 269 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 ALDH1B1P30837 517 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 CDK16Q00536 496 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 ACAD10Q6JQN1 1059 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 CYP4F22Q6NT55 531 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 LVRNQ6Q4G3 990 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 FAM43BQ6ZT52 329 aaPredicted RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 PRUNE1Q86TP1 453 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 SHC3Q92529 594 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms