RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SHCBP1Q8NEM2 672 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNX27-202ENST00000368841 DTNAQ9Y4J8 743 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 NCAM1P13591 858 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 CHRM3P20309 590 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 TEDDM1Q5T9Z0 273 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 JADE3Q92613 823 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 MRPL40Q9NQ50 206 aaKnown RBP19.03■□□□□ 0.64
SNX27-202ENST00000368841 HES6Q96HZ4 224 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 MYO1CO00159 1063 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 NPM3O75607 178 aaKnown RBP19.03■□□□□ 0.64
SNX27-202ENST00000368841 SNRNP35Q16560 246 aaKnown RBP19.03■□□□□ 0.64
SNX27-202ENST00000368841 PODNQ7Z5L7 613 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 GPR63Q9BZJ6 419 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 XPO1O14980 1071 aaKnown RBP19.02■□□□□ 0.64
SNX27-202ENST00000368841 MRPS15P82914 257 aaKnown RBP19.02■□□□□ 0.64
SNX27-202ENST00000368841 ATP11BQ9Y2G3 1177 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 ADGRL3Q9HAR2 1447 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 PVALEFA0A1B0GWK0 134 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 GUCA1CO95843 209 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 YY1P25490 414 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 GTF2H1P32780 548 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 RAP1GAPP47736 663 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 CPB2Q96IY4 423 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 PNKPQ96T60 521 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 GPBP1L1Q9HC44 474 aaPredicted RBP19.02■□□□□ 0.64
SNX27-202ENST00000368841 NDUFB5O43674 189 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 SERPINI2O75830 405 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 EYA4O95677 639 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 NR1H3Q13133 447 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 IYDQ6PHW0 289 aa19.02■□□□□ 0.64
SNX27-202ENST00000368841 WEE1P30291 646 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 PRKCEQ02156 737 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 PTK7Q13308 1070 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 THTPAQ9BU02 230 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 CDYLQ9Y232 598 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 MEI1Q5TIA1 1274 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 STX19Q8N4C7 294 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 FAM71DQ8N9W8 422 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 UNKQ9C0B0 810 aaKnown RBP19.02■□□□□ 0.63
SNX27-202ENST00000368841 APEX2Q9UBZ4 518 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 FAM32AQ9Y421 112 aaKnown RBP19.02■□□□□ 0.63
SNX27-202ENST00000368841 FHOD1Q9Y613 1164 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 SLC30A1Q9Y6M5 507 aa19.02■□□□□ 0.63
SNX27-202ENST00000368841 SPATA21Q7Z572 469 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 RCOR2Q8IZ40 523 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 IL17RAQ96F46 866 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 MAGED4Q96JG8 741 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 CNBD2Q96M20 576 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 TMEM39BQ9GZU3 492 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 NEU2Q9Y3R4 380 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 DISP1Q96F81 1524 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 ATP5HO75947 161 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 SRP72O76094 671 aaKnown RBP19.01■□□□□ 0.63
SNX27-202ENST00000368841 METTL16Q86W50 562 aaKnown RBP19.01■□□□□ 0.63
SNX27-202ENST00000368841 MLH1P40692 756 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 OLFML2BQ68BL8 750 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 CLEC4GQ6UXB4 293 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 ELMO3Q96BJ8 720 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 AGBL1Q96MI9 1066 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 NAGPAQ9UK23 515 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 PTCH1Q13635 1447 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 FLT1P17948 1338 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 PRR23D1E9PI22 279 aaPredicted RBP19.01■□□□□ 0.63
SNX27-202ENST00000368841 PRR23D2P0DMB1 279 aaPredicted RBP19.01■□□□□ 0.63
SNX27-202ENST00000368841 PLA2G4AP47712 749 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 TRPC1P48995 793 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 MROH9Q5TGP6 573 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 STOML1Q9UBI4 398 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 TBC1D4O60343 1298 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 UBTFL6P0CB48 400 aaPredicted RBP19.01■□□□□ 0.63
SNX27-202ENST00000368841 MAGEA9P43362 315 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 VSNL1P62760 191 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 FRMD5Q7Z6J6 570 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 RIN2Q8WYP3 895 aaPredicted RBP19.01■□□□□ 0.63
SNX27-202ENST00000368841 CYFIP2Q96F07 1278 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 PSMD14O00487 310 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 TFRCP02786 760 aaKnown RBP19.01■□□□□ 0.63
SNX27-202ENST00000368841 ZNF556Q9HAH1 456 aa19.01■□□□□ 0.63
SNX27-202ENST00000368841 PRG3Q9Y2Y8 225 aaPredicted RBP19.01■□□□□ 0.63
SNX27-202ENST00000368841 LINC00854A0A1B0GVQ3 168 aa19■□□□□ 0.63
SNX27-202ENST00000368841 H0Y626 953 aa19■□□□□ 0.63
SNX27-202ENST00000368841 FBXW10Q5XX13 1052 aa19■□□□□ 0.63
SNX27-202ENST00000368841 DENND5BQ6ZUT9 1274 aa19■□□□□ 0.63
SNX27-202ENST00000368841 STOX1Q6ZVD7 989 aa19■□□□□ 0.63
SNX27-202ENST00000368841 WNK4Q96J92 1243 aa19■□□□□ 0.63
SNX27-202ENST00000368841 PIF1Q9H611 641 aa19■□□□□ 0.63
SNX27-202ENST00000368841 EXOSC4Q9NPD3 245 aaKnown RBP19■□□□□ 0.63
SNX27-202ENST00000368841 H2AFY2Q9P0M6 372 aaPredicted RBP19■□□□□ 0.63
SNX27-202ENST00000368841 SLC9A1P19634 815 aa19■□□□□ 0.63
SNX27-202ENST00000368841 NCALDP61601 193 aa19■□□□□ 0.63
SNX27-202ENST00000368841 INPP5AQ14642 412 aa19■□□□□ 0.63
SNX27-202ENST00000368841 RABGAP1LQ5R372 815 aa19■□□□□ 0.63
SNX27-202ENST00000368841 GGA3Q9NZ52 723 aa19■□□□□ 0.63
SNX27-202ENST00000368841 CAND2O75155 1236 aa19■□□□□ 0.63
SNX27-202ENST00000368841 VN1R5Q7Z5H4 357 aa19■□□□□ 0.63
SNX27-202ENST00000368841 EHD2Q9NZN4 543 aa19■□□□□ 0.63
SNX27-202ENST00000368841 CEP170Q5SW79 1584 aa19■□□□□ 0.63
SNX27-202ENST00000368841 KRT87PA6NCN2 255 aa19■□□□□ 0.63
SNX27-202ENST00000368841 PTPN7P35236 360 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms