RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TPRG1Q6ZUI0 275 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 GPBP1Q86WP2 473 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 HS6ST3Q8IZP7 471 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 ELMOD1Q8N336 334 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 LEMD2Q8NC56 503 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 BICD1Q96G01 975 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 ASB16Q96NS5 453 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 ZFP14Q9HCL3 533 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 SPATA6Q9NWH7 488 aaPredicted RBP17.43■□□□□ 0.38
CKS1B-202ENST00000368436 SMC3Q9UQE7 1217 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 ZNF292O60281 2723 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 A0A0B4J269 797 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 HNRNPDLO14979 420 aaKnown RBP17.42■□□□□ 0.38
CKS1B-202ENST00000368436 OGTO15294 1046 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 XPOTO43592 962 aaKnown RBP17.42■□□□□ 0.38
CKS1B-202ENST00000368436 CPB1P15086 417 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 TARSP26639 723 aaKnown RBP17.42■□□□□ 0.38
CKS1B-202ENST00000368436 FOXK2Q01167 660 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 FZD5Q13467 585 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 ZNF852Q6ZMS4 543 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 MYCT1Q8N699 235 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 SMARCD2Q92925 531 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 BORCS6Q96GS4 357 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 ZSWIM3Q96MP5 696 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 PARVGQ9HBI0 331 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 HEBP1Q9NRV9 189 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 TIMM13Q9Y5L4 95 aaPredicted RBP17.42■□□□□ 0.38
CKS1B-202ENST00000368436 TICRRQ7Z2Z1 1910 aa17.42■□□□□ 0.38
CKS1B-202ENST00000368436 LAMTOR5O43504 91 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 TRAK2O60296 914 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 FAM13AO94988 1023 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 BMP15O95972 392 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
CKS1B-202ENST00000368436 RPS9P46781 194 aaKnown RBP17.41■□□□□ 0.38
CKS1B-202ENST00000368436 GRIN1Q05586 938 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 GRM2Q14416 872 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 MCM6Q14566 821 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 SPATA1Q5VX52 437 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 LARP1BQ659C4 914 aaKnown RBP17.41■□□□□ 0.38
CKS1B-202ENST00000368436 SLC39A4Q6P5W5 647 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 CD302Q8IX05 232 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 ZNF687Q8N1G0 1237 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 RAD54LQ92698 747 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 FIZ1Q96SL8 496 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 TRMT61BQ9BVS5 477 aaKnown RBP17.41■□□□□ 0.38
CKS1B-202ENST00000368436 LRRC3Q9BY71 257 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 RPF1Q9H9Y2 349 aaKnown RBP17.41■□□□□ 0.38
CKS1B-202ENST00000368436 TRPV4Q9HBA0 871 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 TRPV5Q9NQA5 729 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 ASAH2Q9NR71 780 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 CPSF3Q9UKF6 684 aaKnown RBP17.41■□□□□ 0.38
CKS1B-202ENST00000368436 MRPS17Q9Y2R5 130 aaKnown RBP17.41■□□□□ 0.38
CKS1B-202ENST00000368436 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.41■□□□□ 0.38
CKS1B-202ENST00000368436 TSC2P49815 1807 aa17.41■□□□□ 0.38
CKS1B-202ENST00000368436 OR6C75A6NL08 312 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 K7ENM7 598 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 NCAM2O15394 837 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 MYL4P12829 197 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 PLCG1P19174 1290 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 TYMPP19971 482 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 ABCD1P33897 745 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 ID4P47928 161 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 GUCY2FP51841 1108 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 GTF2BQ00403 316 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 GPR17Q13304 367 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 DHX8Q14562 1220 aaKnown RBP17.4■□□□□ 0.38
CKS1B-202ENST00000368436 VITQ6UXI7 678 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 DSTYKQ6XUX3 929 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 BRAPQ7Z569 592 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 USP37Q86T82 979 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 MAP4K3Q8IVH8 894 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 SUMF1Q8NBK3 374 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 IRF7Q92985 503 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 GPR88Q9GZN0 384 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 CRISPLD1Q9H336 500 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 BRD9Q9H8M2 597 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 YIPF1Q9Y548 306 aa17.4■□□□□ 0.38
CKS1B-202ENST00000368436 EP300Q09472 2414 aaPredicted RBP17.4■□□□□ 0.38
CKS1B-202ENST00000368436 SCN1AP35498 2009 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 PPEF2O14830 753 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 OR4Q2P0C623 313 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 GJA1P17302 382 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 PSMC3P17980 439 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 PAX3P23760 479 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 LILRA4P59901 499 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 DUSP4Q13115 394 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 PLD1Q13393 1074 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 MYBPC2Q14324 1141 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 KARSQ15046 597 aaKnown RBP17.39■□□□□ 0.37
CKS1B-202ENST00000368436 SF3A1Q15459 793 aaKnown RBP17.39■□□□□ 0.37
CKS1B-202ENST00000368436 OVOS1Q6IE37 1185 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 JADE1Q6IE81 842 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 CENPPQ6IPU0 288 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 ERMP1Q7Z2K6 904 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 TMC8Q8IU68 726 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 SHKBP1Q8TBC3 707 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 DEPDC1BQ8WUY9 529 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 NELL1Q92832 810 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 PGLYRP2Q96PD5 576 aa17.39■□□□□ 0.37
CKS1B-202ENST00000368436 MSTO1Q9BUK6 570 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms