RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 C15orf52Q6ZUT6 534 aaKnown RBP11.32□□□□□ -0.6
PTPRK-205ENST00000368213 CARNMT1Q8N4J0 409 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 ADAM2Q99965 735 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 RSAD1Q9HA92 442 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 TTC7AQ9ULT0 858 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-205ENST00000368213 SLC30A1Q9Y6M5 507 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 C3orf70A6NLC5 250 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-205ENST00000368213 TLL1O43897 1013 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 GTF2H1P32780 548 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 HADHAP40939 763 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 NPTX2P47972 431 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 POLD3Q15054 466 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-205ENST00000368213 RABGAP1LQ5R372 815 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 RASSF3Q86WH2 238 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 PPHLN1Q8NEY8 458 aaKnown RBP11.32□□□□□ -0.6
PTPRK-205ENST00000368213 RPRD1AQ96P16 312 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-205ENST00000368213 CIPCQ9C0C6 399 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 ATXN3LQ9H3M9 355 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 CAMTA1Q9Y6Y1 1673 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 REREQ9P2R6 1566 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 LGALS2P05162 132 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 DHX9Q08211 1270 aaKnown RBP11.32□□□□□ -0.6
PTPRK-205ENST00000368213 C4orf19Q8IY42 314 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 LRGUKQ96M69 825 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 ZBTB18Q99592 522 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 CHST12Q9NRB3 414 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 ABHD10Q9NUJ1 306 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 KRT37O76014 449 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 SERPIND1P05546 499 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 RASSF2P50749 326 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 HABP4Q5JVS0 413 aaKnown RBP11.32□□□□□ -0.6
PTPRK-205ENST00000368213 TRAPPC12Q8WVT3 735 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 SDCCAG3Q96C92 435 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 ZNF558Q96NG5 402 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 MTMR12Q9C0I1 747 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 VCX3BQ9H321 246 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 POU5F1BQ06416 359 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 STK33Q9BYT3 514 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 KIF20BQ96Q89 1820 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 ASS1P00966 412 aaKnown RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 DBN1Q16643 649 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 OVOS1Q6IE37 1185 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 C7orf61Q8IZ16 206 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 CERS5Q8N5B7 392 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 SLAIN1Q8ND83 568 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 MORC4Q8TE76 937 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 CINPQ9BW66 212 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 WNT8AQ9H1J5 351 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 SLC28A3Q9HAS3 691 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 PLA2G4CQ9UP65 541 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 PCDHAC2Q9Y5I4 1007 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 SPTLC1O15269 473 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 ZBTB48P10074 688 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 AKAP5P24588 427 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 BRD2P25440 801 aaKnown RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 AXLP30530 894 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 IL1RL1Q01638 556 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 MAP3K21Q5TCX8 1036 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 ZNF410Q86VK4 478 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 HERC6Q8IVU3 1022 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 CACNA2D3Q8IZS8 1091 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 PCDHB5Q9Y5E4 795 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 PODXLO00592 558 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 MED24O75448 989 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 MNAT1P51948 309 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 EDRF1Q3B7T1 1238 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 OOSP2Q86WS3 158 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 PDGFDQ9GZP0 370 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 MRPL17Q9NRX2 175 aaKnown RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 KRT82Q9NSB4 513 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 CFAP99D6REC4 459 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 CA12O43570 354 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 LZTS3O60299 673 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 EIF3EP60228 445 aaKnown RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 SMAD1Q15797 465 aaKnown RBP11.31□□□□□ -0.6
PTPRK-205ENST00000368213 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 KLRG1Q96E93 195 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 AGAP3Q96P47 875 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 HAUS8Q9BT25 410 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 GPR63Q9BZJ6 419 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 KLHL11Q9NVR0 708 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 RAB23Q9ULC3 237 aa11.31□□□□□ -0.6
PTPRK-205ENST00000368213 PSMD3O43242 534 aa11.3□□□□□ -0.6
PTPRK-205ENST00000368213 TTC4O95801 387 aa11.3□□□□□ -0.6
PTPRK-205ENST00000368213 SLCO1A2P46721 670 aa11.3□□□□□ -0.6
PTPRK-205ENST00000368213 NDUFV1P49821 464 aa11.3□□□□□ -0.6
PTPRK-205ENST00000368213 EFEMP1Q12805 493 aa11.3□□□□□ -0.6
PTPRK-205ENST00000368213 PREPLQ4J6C6 727 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-205ENST00000368213 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
PTPRK-205ENST00000368213 VPS11Q9H270 941 aa11.3□□□□□ -0.6
PTPRK-205ENST00000368213 DDIT4Q9NX09 232 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms