RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 TSPAN9O75954 239 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 ALDH1A2O94788 518 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 SESN2P58004 480 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 COPS2P61201 443 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MTM1Q13496 603 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 SLC39A14Q15043 492 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 C10orf53Q8N6V4 93 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 ATG4CQ96DT6 458 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CCDC51Q96ER9 411 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PGLYRP2Q96PD5 576 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 FHDC1Q9C0D6 1143 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 NDST4Q9H3R1 872 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 SH3GLB2Q9NR46 395 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MAGI3Q5TCQ9 1506 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 C19orf81C9J6K1 198 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CYP26A1O43174 497 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CAPZA2P47755 286 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 SMTNL2Q2TAL5 461 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 POM121L1PQ3SYA9 428 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PRAMEF19Q5SWL8 479 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 STYK1Q6J9G0 422 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 STX12Q86Y82 276 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 ARRDC4Q8NCT1 418 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 C18orf25Q96B23 403 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MAGED4Q96JG8 741 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 FAM118BQ9BPY3 351 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MAGEB5Q9BZ81 275 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CIPCQ9C0C6 399 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MIR1-1HGQ9H1L0 117 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PKP3Q9Y446 797 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 STON1Q9Y6Q2 735 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 TARBP1Q13395 1621 aaKnown RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 H7C1W4 665 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PRCPP42785 496 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 RAP1GAPP47736 663 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 KCNH2Q12809 1159 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 NR1H3Q13133 447 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 GRM4Q14833 912 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 ATF7IP2Q5U623 682 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CCDC197Q8NCU1 140 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CSGALNACT1Q8TDX6 532 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 TM6SF1Q9BZW5 370 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 INTS2Q9H0H0 1204 aaKnown RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 GPR108Q9NPR9 543 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 ADAMTS1Q9UHI8 967 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 ADCY10Q96PN6 1610 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 ASAP2O43150 1006 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 TSPAN3O60637 253 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MYO1DO94832 1006 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 FGGP02679 453 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 KLRK1P26718 216 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CDC27P30260 824 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 NRG3P56975 720 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 LY6KQ17RY6 165 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 TMEM35BQ8NCS4 154 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 ZNF564Q8TBZ8 553 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MLPHQ9BV36 600 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PDGFDQ9GZP0 370 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 SOX13Q9UN79 622 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 FTLP02792 175 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PHKG1Q16816 387 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 KNOP1Q1ED39 458 aaKnown RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 NBPF12Q5TAG4 269 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 DDI1Q8WTU0 396 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 KAT2BQ92831 832 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 KLHL29Q96CT2 875 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PNKPQ96T60 521 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CAPS2Q9BXY5 557 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 FBXO10Q9UK96 956 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PNMA8BQ9ULN7 279 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PFASO15067 1338 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 SMCO3A2RU48 225 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 RBM41Q96IZ5 413 aaKnown RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 VPS39Q96JC1 886 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 TAAR1Q96RJ0 339 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MTFR1LQ9H019 292 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 DIAPH2O60879 1101 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 SUPT3HO75486 399 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 IGKV5-2P06315 115 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 TP53BP2Q13625 1128 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 DRAP1Q14919 205 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-201ENST00000368147 EMC2Q15006 297 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 PTGISQ16647 500 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 NFRKBQ6P4R8 1299 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 KLHL24Q6TFL4 600 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 IKBIPQ70UQ0 350 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 SCFD1Q8WVM8 642 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 DNAJC5Q9H3Z4 198 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 BARHL2Q9NY43 387 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 MSRAQ9UJ68 235 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 CHMP2BQ9UQN3 213 aa7.41□□□□□ -1.22
SPTA1-201ENST00000368147 IQANK1A0A1B0GTG1 560 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 NDUFB10O96000 172 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ITGB3P05106 788 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 CALB1P05937 261 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 STAG3L1P0CL83 205 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 KCNA2P16389 499 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 SUZ12Q15022 739 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms