RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ODC1P11926 461 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 MLNP12872 115 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 RGS2P41220 211 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 ALDH18A1P54886 795 aaKnown RBP16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 PTK6Q13882 451 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 ERAP2Q6P179 960 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 KRT78Q8N1N4 520 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 OLFM3Q96PB7 478 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 TASP1Q9H6P5 420 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 PRMT7Q9NVM4 692 aaPredicted RBP16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 RIC8BQ9NVN3 520 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 ERAP1Q9NZ08 941 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 C16orf96A6NNT2 1141 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 DYRK3O43781 588 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 C11orf96Q7Z7L8 435 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 HORMAD1Q86X24 394 aa16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 RBBP8NLQ8NC74 664 aaPredicted RBP16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 MRPL1Q9BYD6 325 aaKnown RBP16.45■□□□□ 0.22
NUCKS1-201ENST00000367142 HMGB3O15347 200 aaKnown RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 CCDC157Q569K6 752 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 GLT1D1Q96MS3 346 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 C17orf80Q9BSJ5 609 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 KRCC1Q9NPI7 259 aaPredicted RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 MRGBPQ9NV56 204 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 GGA3Q9NZ52 723 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 RNASEH1O60930 286 aaKnown RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 SERPINI2O75830 405 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 ATP1A1P05023 1023 aaKnown RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 ALOX15P16050 662 aaPredicted RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 GGCXP38435 758 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 TRPC1P48995 793 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 MAPRE1Q15691 268 aaKnown RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 EFHC1Q5JVL4 640 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 UGT3A1Q6NUS8 523 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 TBC1D16Q8TBP0 767 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 USP13Q92995 863 aaPredicted RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 ZC3H7BQ9UGR2 993 aaKnown RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 NAGPAQ9UK23 515 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 DISP1Q96F81 1524 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 HSPA9P38646 679 aaKnown RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 MAP3K7CLP57077 242 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 FAM84BQ96KN1 310 aaPredicted RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 ENTPD7Q9NQZ7 604 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 C20orf96Q9NUD7 363 aaPredicted RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 PNPLA7Q6ZV29 1317 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 VCLP18206 1134 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 APEX2Q9UBZ4 518 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 XPO7Q9UIA9 1087 aaKnown RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 VPS9D1Q9Y2B5 631 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 PP2D1A8MPX8 630 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 HBP1O60381 514 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 EGFRP00533 1210 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 ETFBP38117 255 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 GOLGA7BQ2TAP0 167 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 CYP4A22Q5TCH4 519 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 MCEEQ96PE7 176 aa16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.44■□□□□ 0.22
NUCKS1-201ENST00000367142 NPHP3-ACAD11A0A0J9YXS1 232 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 A0A1B0GW55 424 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 NR3C2P08235 984 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DUX4L2P0CJ85 424 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DUX4L3P0CJ86 424 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DUX4L4P0CJ87 422 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DUX4L5P0CJ88 424 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DUX4L6P0CJ89 424 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DUX4L7P0CJ90 424 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 CPA5Q8WXQ8 436 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DUX4Q9UBX2 424 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 CDYLQ9Y232 598 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 A0A1W2PQC6 194 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 VCAM1P19320 739 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 EFCAB12Q6NXP0 572 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 TRABDQ9H4I3 376 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 APRTP07741 180 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 SLC11A2P49281 568 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 ATP2C1P98194 919 aaPredicted RBP16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 UBE3AQ05086 875 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 R3HDM1Q15032 1099 aaKnown RBP16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 C16orf89Q6UX73 402 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 RNPC3Q96LT9 517 aaKnown RBP16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 BRD8Q9H0E9 1235 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 MAGI2Q86UL8 1455 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 ANXA11P50995 505 aaKnown RBP16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 PRKCEQ02156 737 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 LAMC2Q13753 1193 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 SMG5Q9UPR3 1016 aaKnown RBP16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 TBX3O15119 743 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 NPTXRO95502 500 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DARSP14868 501 aaKnown RBP16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 PLA2G4AP47712 749 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 LRRC14Q15048 493 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 GNASQ5JWF2 1037 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 C12orf60Q5U649 245 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 ADCK1Q86TW2 530 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 DHX40Q8IX18 779 aaKnown RBP16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 PCYOX1LQ8NBM8 494 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 GJB4Q9NTQ9 266 aa16.43■□□□□ 0.22
NUCKS1-201ENST00000367142 NYAP2Q9P242 653 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms