RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 TIGD1Q96MW7 591 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 WDR92Q96MX6 357 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 C7orf26Q96N11 449 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KCNC2Q96PR1 638 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PRPF18Q99633 342 aaKnown RBP4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 C1orf43Q9BWL3 253 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 BRD9Q9H8M2 597 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SEPSECSQ9HD40 501 aaKnown RBP4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DLL4Q9NR61 685 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TBC1D23Q9NUY8 699 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 USP40Q9NVE5 1235 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NSMCE4AQ9NXX6 385 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PIM2Q9P1W9 311 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AASSQ9UDR5 926 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 FEM1BQ9UK73 627 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 JAG2Q9Y219 1238 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 FSD2A1L4K1 749 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TEX33O43247 280 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DAPK3O43293 454 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ADCY6O43306 1168 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KCNQ3O43525 872 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PSPNO60542 156 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ADAM23O75077 832 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 INMTO95050 263 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MATN4O95460 622 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RPN1P04843 607 aaKnown RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GNAI3P08754 354 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GAAP10253 952 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MYCLP12524 364 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IL2RBP14784 551 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 FOSL1P15407 271 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IL1R2P27930 398 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GUCY1A2P33402 732 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CRHR1P34998 444 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HOXD12P35452 270 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MAN2A2P49641 1150 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TERF1P54274 439 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GNAI1P63096 354 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 POU6F2P78424 691 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CTBP1Q13363 440 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ADAM9Q13443 819 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MTM1Q13496 603 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DLGAP5Q15398 846 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MAPKAPK3Q16644 382 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TRIM71Q2Q1W2 868 aaKnown RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CR1LQ2VPA4 569 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CCDC184Q52MB2 194 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RRAGBQ5VZM2 374 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZC3H18Q86VM9 953 aaKnown RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AMIGO3Q86WK7 504 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TCP11L2Q8N4U5 519 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZGPATQ8N5A5 531 aaKnown RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LSMEM1Q8N8F7 131 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DTX3Q8N9I9 347 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 BCL7CQ8WUZ0 217 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HVCN1Q96D96 273 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 UIMC1Q96RL1 719 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DDX23Q9BUQ8 820 aaKnown RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CCDC68Q9H2F9 335 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PRKRIP1Q9H875 184 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ARHGAP20Q9P2F6 1191 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TRPS1Q9UHF7 1281 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DNAI1Q9UI46 699 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 FBXO10Q9UK96 956 aa4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SCAF8Q9UPN6 1271 aaKnown RBP4.25□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ASNA1O43681 348 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GLP2RO95838 553 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 A1BGP04217 495 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IL1R1P14778 569 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NPPBP16860 134 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 EGR1P18146 543 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AARSP49588 968 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HK2P52789 917 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ACTR2P61160 394 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AP2B1P63010 937 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZP2Q05996 745 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CHRNDQ07001 517 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KIF22Q14807 665 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PABPC1LQ4VXU2 614 aaKnown RBP4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SPECC1Q5M775 1068 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TMEM200BQ69YZ2 307 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LIPIQ6XZB0 460 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SLC51AQ86UW1 340 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PIK3C3Q8NEB9 887 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZMIZ2Q8NF64 920 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 OR6Y1Q8NGX8 325 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CXorf38Q8TB03 319 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ADAMTS15Q8TE58 950 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AFG1LQ8WV93 481 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RSC1A1Q92681 617 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NKD2Q969F2 451 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RRP36Q96EU6 259 aaKnown RBP4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TMEM209Q96SK2 561 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SDF4Q9BRK5 362 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ANKEF1Q9NU02 776 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RLIMQ9NVW2 624 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TMEM160Q9NX00 188 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GPRC5DQ9NZD1 345 aa4.24□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CFAP97Q9P2B7 532 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms