RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ZNF648Q5T619 568 aaPredicted RBP4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 OGFOD2Q6N063 350 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 MFSD5Q6N075 450 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 ARHGEF18Q6ZSZ5 1173 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 UBE3BQ7Z3V4 1068 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 APBB1IPQ7Z5R6 666 aaPredicted RBP4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 FAM83AQ86UY5 434 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 LIX1LQ8IVB5 337 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 NKAPQ8N5F7 415 aaKnown RBP4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 CCDC33Q8N5R6 958 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 AOPEPQ8N6M6 819 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 ZFP28Q8NHY6 868 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 SCAMP4Q969E2 229 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 TMEM41AQ96HV5 264 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 DPYSL5Q9BPU6 564 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 C12orf65Q9H3J6 166 aaKnown RBP4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 GSTO2Q9H4Y5 243 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 SLAMF7Q9NQ25 335 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 SERHLQ9NQF3 203 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 FBXO34Q9NWN3 711 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 MYO1AQ9UBC5 1043 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 SRRDQ9UH36 339 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 A0A087WV62 115 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 A0A087WWL8 130 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 NUAK1O60285 661 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 CDC14BO60729 498 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 DNAJB5O75953 348 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 CHEK2O96017 543 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 GNAI2P04899 355 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 HARSP12081 509 aaKnown RBP4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 FGFR2P21802 821 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 RPS19P39019 145 aaKnown RBP4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 TECP42680 631 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 PHKA1P46020 1223 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 HSPA7P48741 367 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 MXRA7P84157 204 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 TCF15Q12870 199 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 CTBP1Q13363 440 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 RAB32Q13637 225 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 PMS2P11Q13670 270 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 RAPGEF1Q13905 1077 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 MPEG1Q2M385 716 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 ARL13BQ3SXY8 428 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 TUBB8Q3ZCM7 444 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 SLC44A4Q53GD3 710 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 HSP90AB4PQ58FF6 505 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 ATXN7L2Q5T6C5 722 aaPredicted RBP4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 KLHDC7AQ5VTJ3 777 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 ANO1Q5XXA6 986 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 LMBRD2Q68DH5 695 aaPredicted RBP4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 DRICH1Q6PGQ1 229 aaPredicted RBP4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 XYLT1Q86Y38 959 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 MYRIPQ8NFW9 859 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 ATXN2LQ8WWM7 1075 aaKnown RBP4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 PPM1EQ8WY54 764 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 SNX22Q96L94 193 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 LMF1Q96S06 567 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 TTLL2Q9BWV7 592 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 EPC1Q9H2F5 836 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 A1CFQ9NQ94 594 aaKnown RBP4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 CDC23Q9UJX2 597 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 SLC45A2Q9UMX9 530 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 CLCA2Q9UQC9 943 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 PLEKHM1Q9Y4G2 1056 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 RNF114Q9Y508 228 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 PCDHGB2Q9Y5G2 931 aa4.54□□□□□ -1.68
RNU6-28P-201ENST00000362378 MBD3L4A6NDZ8 208 aaPredicted RBP4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 MBD3L3A6NE82 208 aaPredicted RBP4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 CLCA1A8K7I4 914 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 PRR5-ARHGAP8B1AHC4 643 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 AREL1O15033 823 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 PIP5K1CO60331 668 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 PLA2G6O60733 806 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 NBNO60934 754 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 UNC5CO95185 931 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 FGAP02671 866 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 MT-ND5P03915 603 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 ANXA2P07355 339 aaKnown RBP4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 INHBBP09529 407 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 RAP2BP61225 183 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 POU6F2P78424 691 aaPredicted RBP4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 GRM7Q14831 915 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 PDCD2Q16342 344 aaPredicted RBP4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 SLC35G1Q2M3R5 365 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 PRR16Q569H4 304 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 UTP14CQ5TAP6 766 aaKnown RBP4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 NT5DC1Q5TFE4 455 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 SLFN13Q68D06 897 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 CATSPERGQ6ZRH7 1159 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 BEND5Q7L4P6 421 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 USP37Q86T82 979 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 SYTL1Q8IYJ3 562 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 SDR16C5Q8N3Y7 309 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 FITM2Q8N6M3 262 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 DNAJC5GQ8N7S2 189 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 ANKRD42Q8N9B4 389 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 TFAP2CQ92754 450 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 IQCDQ96DY2 449 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 GDF15Q99988 308 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 PLA2G12BQ9BX93 195 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms