RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 POLIQ9UNA4 740 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 SMG5Q9UPR3 1016 aaKnown RBP12.01□□□□□ -0.49
COL4A5-202ENST00000361603 FAM170AA1A519 330 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 MSCO60682 206 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 PRLRP16471 622 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 DISP2A7MBM2 1401 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 CYP3A7-CYP3A51PA0A087WV96 503 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 EEF2KO00418 725 aaKnown RBP12.01□□□□□ -0.49
COL4A5-202ENST00000361603 ACSL3O95573 720 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 CYP3A7P24462 503 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 FNTAP49354 379 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 PRAMEF18Q5VWM3 479 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 ACAD11Q709F0 780 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 RRP15Q9Y3B9 282 aaKnown RBP12.01□□□□□ -0.49
COL4A5-202ENST00000361603 RASA4BC9J798 803 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 RASA4O43374 803 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 KPNA1P52294 538 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-202ENST00000361603 DEUP1Q05D60 604 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 TTI2Q6NXR4 508 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 RAB42Q8N4Z0 105 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 CDCA5Q96FF9 252 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 GPRC5DQ9NZD1 345 aa12.01□□□□□ -0.49
COL4A5-202ENST00000361603 ZMYND10O75800 440 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 GYPCP04921 128 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 RPL10AP62906 217 aaKnown RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 PDK2Q15119 407 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 HIF1AQ16665 826 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 AP1ARQ63HQ0 302 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 RNF168Q8IYW5 571 aaPredicted RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 LRRC71Q8N4P6 559 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 ATP6V0D2Q8N8Y2 350 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 DYRK4Q9NR20 520 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 SUN2Q9UH99 717 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 TOMM70O94826 608 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 AGTP01019 485 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 IFNAR2P48551 515 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 SLC7A5Q01650 507 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 PDIA2Q13087 525 aaKnown RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 TRIM65Q6PJ69 517 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 CATSPERGQ6ZRH7 1159 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 TRIM67Q6ZTA4 783 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 EPM2AIP1Q7L775 607 aaPredicted RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 RASSF3Q86WH2 238 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 GIPC2Q8TF65 315 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 POLD4Q9HCU8 107 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 PTPRAP18433 802 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 GOLGA7BQ2TAP0 167 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 CDKAL1Q5VV42 579 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 LMBRD2Q68DH5 695 aaPredicted RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 RPAINQ86UA6 219 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 CCNJLQ8IV13 435 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 TPX2Q9ULW0 747 aaKnown RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 SLC15A5A6NIM6 579 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 CTSHP09668 335 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 SLC9A1P19634 815 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 PRAMEP78395 509 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 MCL1Q07820 350 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 CYP24A1Q07973 514 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 SFSWAPQ12872 951 aaKnown RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 ZDHHC17Q8IUH5 632 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 MMGT1Q8N4V1 131 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 MCUQ8NE86 351 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 ROPN1BQ9BZX4 212 aaPredicted RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 ROPN1Q9HAT0 212 aaPredicted RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 FAM237AA0A1B0GTK4 181 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 FXR1P51114 621 aaKnown RBP eCLIP12□□□□□ -0.49
COL4A5-202ENST00000361603 TDRD10Q5VZ19 366 aaKnown RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 GPAT2Q6NUI2 795 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 GANCQ8TET4 914 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 ASIC4Q96FT7 647 aa12□□□□□ -0.49
COL4A5-202ENST00000361603 DDX4Q9NQI0 724 aaKnown RBP12□□□□□ -0.49
COL4A5-202ENST00000361603 LMNAP02545 664 aaKnown RBP11.99□□□□□ -0.49
COL4A5-202ENST00000361603 ARSEP51690 589 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 FBXO38Q6PIJ6 1188 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 PARD3BQ8TEW8 1205 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 DDX47Q9H0S4 455 aaKnown RBP11.99□□□□□ -0.49
COL4A5-202ENST00000361603 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 ST8SIA6P61647 398 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 PPP2R2AP63151 447 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 LINC00523Q86TU6 105 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 NFIBO00712 420 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 STIP1P31948 543 aaKnown RBP11.99□□□□□ -0.49
COL4A5-202ENST00000361603 FDFT1P37268 417 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 PID1Q7Z2X4 250 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 TMEM134Q9H6X4 195 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 HNRNPCL1O60812 293 aaKnown RBP11.99□□□□□ -0.49
COL4A5-202ENST00000361603 ZNF135P52742 658 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-202ENST00000361603 PDE1CQ14123 709 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-202ENST00000361603 ATP6V1G3Q96LB4 118 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 PRDM5Q9NQX1 630 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-202ENST00000361603 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 NCK2O43639 380 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 BCAT1P54687 386 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 PLD1Q13393 1074 aa11.99□□□□□ -0.49
COL4A5-202ENST00000361603 MRPL9Q9BYD2 267 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms