RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ANP32DO95626 131 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 CYP2C8P10632 490 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 DHX34Q14147 1143 aaKnown RBP19.53■□□□□ 0.72
CLIP2-202ENST00000361545 DACT2Q5SW24 774 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 PCSK9Q8NBP7 692 aaKnown RBP19.53■□□□□ 0.72
CLIP2-202ENST00000361545 KIF3CO14782 793 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 MAP3K7O43318 606 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 ODC1P11926 461 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 KCNA1Q09470 495 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 ACAD11Q709F0 780 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 COLEC11Q9BWP8 271 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 ATP11BQ9Y2G3 1177 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 TMEM247A6NEH6 219 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 SPAG7O75391 227 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 LRG1P02750 347 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 RFC1P35251 1148 aaPredicted RBP19.53■□□□□ 0.72
CLIP2-202ENST00000361545 NAB2Q15742 525 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 SNCBQ16143 134 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 ZBTB41Q5SVQ8 909 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 SLC30A10Q6XR72 485 aa19.53■□□□□ 0.72
CLIP2-202ENST00000361545 ZC3H11AO75152 810 aaKnown RBP eCLIP19.52■□□□□ 0.72
CLIP2-202ENST00000361545 P3H1Q32P28 736 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 C1orf131Q8NDD1 294 aaKnown RBP19.52■□□□□ 0.72
CLIP2-202ENST00000361545 AGR3Q8TD06 166 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 AIPL1Q9NZN9 384 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 DCTN4Q9UJW0 460 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 FBXL5Q9UKA1 691 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 PPP1R3GB7ZBB8 358 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 NAMPTP43490 491 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 HARS2P49590 506 aaKnown RBP19.52■□□□□ 0.72
CLIP2-202ENST00000361545 TWF1Q12792 350 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 ANKRD20A4Q4UJ75 823 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 ANKRD20A8PQ5CZ79 823 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 ANKRD20A2Q5SQ80 823 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 ANKRD20A1Q5TYW2 823 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 HASPINQ8TF76 798 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 TUBB6Q9BUF5 446 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 KIAA1683Q9H0B3 1180 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 SNX12Q9UMY4 172 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 TCRBV5S4A2TA0A5A2 114 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 CFAP69A5D8W1 941 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 GPD1P21695 349 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 ETFBP38117 255 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 TBC1D1Q86TI0 1168 aaPredicted RBP19.52■□□□□ 0.72
CLIP2-202ENST00000361545 AAASQ9NRG9 546 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 SETD4Q9NVD3 440 aa19.52■□□□□ 0.72
CLIP2-202ENST00000361545 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.52■□□□□ 0.72
CLIP2-202ENST00000361545 FAM205AQ6ZU69 1335 aa19.52■□□□□ 0.71
CLIP2-202ENST00000361545 CASP7P55210 303 aa19.52■□□□□ 0.71
CLIP2-202ENST00000361545 SOX10P56693 466 aa19.52■□□□□ 0.71
CLIP2-202ENST00000361545 LRRC14Q15048 493 aa19.52■□□□□ 0.71
CLIP2-202ENST00000361545 P2RX7Q99572 595 aaKnown RBP19.52■□□□□ 0.71
CLIP2-202ENST00000361545 CBWD1Q9BRT8 395 aa19.52■□□□□ 0.71
CLIP2-202ENST00000361545 FHDC1Q9C0D6 1143 aaPredicted RBP19.52■□□□□ 0.71
CLIP2-202ENST00000361545 KRT82Q9NSB4 513 aa19.52■□□□□ 0.71
CLIP2-202ENST00000361545 DIAPH2O60879 1101 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 MOXD1Q6UVY6 613 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 DEFB128Q7Z7B8 93 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 SERPINI1Q99574 410 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 OSMRQ99650 979 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 SALL1Q9NSC2 1324 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 H3BRB1 525 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 VWA5AO00534 786 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 SKIP12755 728 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 ACO1P21399 889 aaKnown RBP19.51■□□□□ 0.71
CLIP2-202ENST00000361545 EFHC1Q5JVL4 640 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 TRIM51Q9BSJ1 452 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 TUT1Q9H6E5 874 aaKnown RBP19.51■□□□□ 0.71
CLIP2-202ENST00000361545 AGO4Q9HCK5 861 aaKnown RBP19.51■□□□□ 0.71
CLIP2-202ENST00000361545 ITIH6Q6UXX5 1313 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 A0A087WZ62 844 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 P4HA2O15460 535 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 SYF2O95926 243 aaKnown RBP19.51■□□□□ 0.71
CLIP2-202ENST00000361545 COMTP21964 271 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 AKT1P31749 480 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 CUL2Q13617 745 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 CAPRIN1Q14444 709 aaKnown RBP19.51■□□□□ 0.71
CLIP2-202ENST00000361545 MPZL3Q6UWV2 235 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 ZNF467Q7Z7K2 595 aaPredicted RBP19.51■□□□□ 0.71
CLIP2-202ENST00000361545 NUDCD3Q8IVD9 361 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 FDXACB1Q9BRP7 624 aaPredicted RBP19.51■□□□□ 0.71
CLIP2-202ENST00000361545 IL17RBQ9NRM6 502 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 KCNA4P22459 653 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 ZFPM1Q8IX07 1006 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 LRRC1Q9BTT6 524 aa19.51■□□□□ 0.71
CLIP2-202ENST00000361545 MTM1Q13496 603 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 APOBEC3HQ6NTF7 200 aaKnown RBP19.5■□□□□ 0.71
CLIP2-202ENST00000361545 METTL7BQ6UX53 244 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 LCA5Q86VQ0 697 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 MYCBPQ99417 103 aaPredicted RBP19.5■□□□□ 0.71
CLIP2-202ENST00000361545 RIOX1Q9H6W3 641 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 SLC8A1P32418 973 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 BFSP2Q13515 415 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 PGM5Q15124 567 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 RBBP7Q16576 425 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 TRAPPC11Q7Z392 1133 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 MRFAP1Q9Y605 127 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 SMIM24O75264 130 aa19.5■□□□□ 0.71
CLIP2-202ENST00000361545 TDRD10Q5VZ19 366 aaKnown RBP19.5■□□□□ 0.71
CLIP2-202ENST00000361545 TRMT10CQ7L0Y3 403 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms