RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 HERPUD2Q9BSE4 406 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 PCYOX1Q9UHG3 505 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 AKT3Q9Y243 479 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 FRMD4BQ9Y2L6 1034 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 CFAP73A6NFT4 308 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 C19orf81C9J6K1 198 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 TNPO2O14787 897 aaKnown RBP9.65□□□□□ -0.86
TOP1-201ENST00000361337 SLC16A3O15427 465 aaKnown RBP9.65□□□□□ -0.86
TOP1-201ENST00000361337 ATP9AO75110 1047 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 LUC7L3O95232 432 aaKnown RBP9.65□□□□□ -0.86
TOP1-201ENST00000361337 RARGP13631 454 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 RPL13P26373 211 aaKnown RBP9.65□□□□□ -0.86
TOP1-201ENST00000361337 RFC1P35251 1148 aaPredicted RBP9.65□□□□□ -0.86
TOP1-201ENST00000361337 PSMC2P35998 433 aaKnown RBP9.65□□□□□ -0.86
TOP1-201ENST00000361337 COILP38432 576 aaPredicted RBP9.65□□□□□ -0.86
TOP1-201ENST00000361337 SLC8A3P57103 927 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 TMEM132BQ14DG7 1078 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 KYNUQ16719 465 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 SEZ6Q53EL9 994 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 PHLDB2Q86SQ0 1253 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 GSDMBQ8TAX9 411 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 CRYGNQ8WXF5 182 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 POMGNT1Q8WZA1 660 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 COPS5Q92905 334 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 TMEM237Q96Q45 408 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 FIZ1Q96SL8 496 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 AGPAT1Q99943 283 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 ARHGEF3Q9NR81 526 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 WRAP73Q9P2S5 460 aaPredicted RBP9.65□□□□□ -0.86
TOP1-201ENST00000361337 APEX2Q9UBZ4 518 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 SCOCQ9UIL1 159 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 RASAL2Q9UJF2 1139 aa9.65□□□□□ -0.86
TOP1-201ENST00000361337 PDHXO00330 501 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 CLDN3O15551 220 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 MAP3K13O43283 966 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 CHRNA3P32297 505 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 SERPINB4P48594 390 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 NT5C2P49902 561 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 PAPOLAP51003 745 aaKnown RBP9.65□□□□□ -0.87
TOP1-201ENST00000361337 LY6KQ17RY6 165 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 ZNF568Q3ZCX4 644 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 ANKRD20A2Q5SQ80 823 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 ANKRD20A1Q5TYW2 823 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 ANKRD20A3Q5VUR7 823 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 ASRGL1Q7L266 308 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 SPATA21Q7Z572 469 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 SESTD1Q86VW0 696 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 ECHDC2Q86YB7 292 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 LMO3Q8TAP4 145 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 NACC1Q96RE7 527 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 FNBP1Q96RU3 617 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 MRIQ9BWK5 157 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 KIAA1683Q9H0B3 1180 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 ETNK1Q9HBU6 452 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 VAV3Q9UKW4 847 aa9.65□□□□□ -0.87
TOP1-201ENST00000361337 GTPBP10A4D1E9 387 aaKnown RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 ANXA13P27216 316 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 HOXA7P31268 230 aaPredicted RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 FOXN2P32314 431 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 STX2P32856 288 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 NFX1Q12986 1120 aaKnown RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 MYLK4Q86YV6 388 aaPredicted RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 SLC7A3Q8WY07 619 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 FGD4Q96M96 766 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 SPATA33Q96N06 139 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 NAP1L3Q99457 506 aaPredicted RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 UBE2TQ9NPD8 197 aaPredicted RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 RNF19AQ9NV58 838 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 MTRF1LQ9UGC7 380 aaKnown RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 SH3BP1Q9Y3L3 701 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 CYP3A7-CYP3A51PA0A087WV96 503 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 SGPL1O95470 568 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 GM2AP17900 193 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 CYP3A7P24462 503 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 SCNN1BP51168 640 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 THNSL1Q8IYQ7 743 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 MBOAT7Q96N66 472 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 CHST7Q9NS84 486 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 DNAJC6O75061 913 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 SMNDC1O75940 238 aaKnown RBP eCLIP9.64□□□□□ -0.87
TOP1-201ENST00000361337 ECEL1O95672 775 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 ZCCHC18P0CG32 403 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 KRT5P13647 590 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 FKBP1AP62942 108 aaKnown RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 MYL7Q01449 175 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 LRRC36Q1X8D7 754 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 MFSD5Q6N075 450 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 SLC13A5Q86YT5 568 aaPredicted RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 HIPK4Q8NE63 616 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 GMCL1P1Q8NEA9 526 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 FAM84AQ96KN4 292 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 TGS1Q96RS0 853 aaKnown RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 TMEM109Q9BVC6 243 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 UNC45AQ9H3U1 944 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 AGPAT3Q9NRZ7 376 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 CHCHD3Q9NX63 227 aaKnown RBP9.64□□□□□ -0.87
TOP1-201ENST00000361337 KLHL14Q9P2G3 628 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 PRKAG3Q9UGI9 489 aa9.64□□□□□ -0.87
TOP1-201ENST00000361337 SYNGAP1Q96PV0 1343 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms