RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 CRNKL1Q9BZJ0 848 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 CYP4F11Q9HBI6 524 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 UBE2TQ9NPD8 197 aaPredicted RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 INIPQ9NRY2 104 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 PPARGC1AQ9UBK2 798 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 TMEM94Q12767 1356 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 DYTNA2CJ06 578 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 USP17L5A8MUK1 530 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 EIF3FO00303 357 aaPredicted RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 DKC1O60832 514 aaKnown RBP eCLIP9.11□□□□□ -0.95
CD46-206ENST00000360212 GAS8O95995 478 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 PEX2P28328 305 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 MAGEA4P43358 317 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ATXN3P54252 364 aaPredicted RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 PHEXP78562 749 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 SLC45A4Q5BKX6 768 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 CMPK2Q5EBM0 449 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 TMEM53Q6P2H8 277 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 RBM15BQ8NDT2 890 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 OLIG1Q8TAK6 271 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 C7orf43Q8WVR3 580 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 HAPLN3Q96S86 360 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 NUP85Q9BW27 656 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 BRIP1Q9BX63 1249 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 PLA2G12BQ9BX93 195 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ANKFY1Q9P2R3 1169 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ANGPTL2Q9UKU9 493 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 PCDHA2Q9Y5H9 948 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 MROH7Q68CQ1 1323 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 FCHO1O14526 889 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 EDIL3O43854 480 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 MED24O75448 989 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 POTEJP0CG39 1038 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 MYL2P10916 166 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 NELFEP18615 380 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 SERPINB6P35237 376 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 SLC16A2P36021 539 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ALDH18A1P54886 795 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 NPEPPSP55786 919 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 HDAC4P56524 1084 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ASPHQ12797 758 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 GK3PQ14409 553 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ZNF280DQ6N043 979 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 MAPKAPK5Q8IW41 473 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 FAM186BQ8IYM0 893 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ZBED8Q8IZ13 594 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 NME8Q8N427 588 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 POU5F2Q8N7G0 328 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 HAS1Q92839 578 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 SRPK1Q96SB4 655 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 REEP2Q9BRK0 252 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 ZNF212Q9UDV6 495 aa9.11□□□□□ -0.95
CD46-206ENST00000360212 MARF1Q9Y4F3 1742 aaKnown RBP9.11□□□□□ -0.95
CD46-206ENST00000360212 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 CIB2O75838 187 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 IFNB1P01574 187 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 NFKBIAP25963 317 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 VARSP26640 1264 aaKnown RBP9.1□□□□□ -0.95
CD46-206ENST00000360212 PLCB3Q01970 1234 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 PEX6Q13608 980 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 PDE1CQ14123 709 aaPredicted RBP9.1□□□□□ -0.95
CD46-206ENST00000360212 SIX1Q15475 284 aaPredicted RBP9.1□□□□□ -0.95
CD46-206ENST00000360212 TRIP10Q15642 601 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 SUSD4Q5VX71 490 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 GRAMD4Q6IC98 578 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 USP17L6PQ6QN14 398 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 CYFIP1Q7L576 1253 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 LRRC47Q8N1G4 583 aaKnown RBP9.1□□□□□ -0.95
CD46-206ENST00000360212 TCP10LQ8TDR4 215 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 MTBPQ96DY7 904 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 PTCD3Q96EY7 689 aaKnown RBP9.1□□□□□ -0.95
CD46-206ENST00000360212 TCHPQ9BT92 498 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 CENPOQ9BU64 300 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 TRIM55Q9BYV6 548 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 PCIF1Q9H4Z3 704 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 RABL2BQ9UNT1 228 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 USTQ9Y2C2 406 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 EFR3BQ9Y2G0 817 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 RICTORQ6R327 1708 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 C2CD2LO14523 706 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 BGNP21810 368 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 ARL4CP56559 192 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 RASA2Q15283 850 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 TREML1Q86YW5 311 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 ZNF564Q8TBZ8 553 aaPredicted RBP9.1□□□□□ -0.95
CD46-206ENST00000360212 FAM84AQ96KN4 292 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 AGPAT1Q99943 283 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 SPZ1Q9BXG8 430 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 STK33Q9BYT3 514 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 SLC7A8Q9UHI5 535 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 NENFQ9UMX5 172 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 PCNTO95613 3336 aa9.1□□□□□ -0.95
CD46-206ENST00000360212 USP17L15C9J2P7 530 aa9.09□□□□□ -0.95
CD46-206ENST00000360212 USP17L13C9JLJ4 530 aa9.09□□□□□ -0.95
CD46-206ENST00000360212 USP17L11C9JVI0 530 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms