RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SPATA31A1Q5TZJ5 1347 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 TXNP10599 105 aaKnown RBP14.42□□□□□ -0.1
VCP-201ENST00000358901 KLC1Q07866 573 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 SLC10A5Q5PT55 438 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 ACER1Q8TDN7 264 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 SERPINB12Q96P63 405 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 IL17RBQ9NRM6 502 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 DONSONQ9NYP3 566 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 L3MBTL1Q9Y468 752 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 MEGF6O75095 1541 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 B2RBV5 119 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 RARGP13631 454 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 CLTCQ00610 1675 aaKnown RBP14.42□□□□□ -0.1
VCP-201ENST00000358901 ITPRIPL1Q6GPH6 555 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 PDCD6IPQ8WUM4 868 aaKnown RBP14.42□□□□□ -0.1
VCP-201ENST00000358901 MTBPQ96DY7 904 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 MOV10L1Q9BXT6 1211 aaKnown RBP14.42□□□□□ -0.1
VCP-201ENST00000358901 TMEM39BQ9GZU3 492 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 UNC45AQ9H3U1 944 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 IGSF9BQ9UPX0 1349 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 A0A0U1RQJ8 604 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 PSMC6P62333 389 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 PRAMEP78395 509 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 CENPCQ03188 943 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 NSUN2Q08J23 767 aaKnown RBP eCLIP14.41□□□□□ -0.1
VCP-201ENST00000358901 FOXD4Q12950 439 aaPredicted RBP14.41□□□□□ -0.1
VCP-201ENST00000358901 NOD2Q9HC29 1040 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 WARS2Q9UGM6 360 aaKnown RBP14.41□□□□□ -0.1
VCP-201ENST00000358901 TBX20Q9UMR3 447 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 LRRC10BA6NIK2 292 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 F8VZ95 297 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 DNAJC8O75937 253 aaPredicted RBP14.41□□□□□ -0.1
VCP-201ENST00000358901 EFTUD2Q15029 972 aaKnown RBP eCLIP14.41□□□□□ -0.13e-6■■■□□ 16.4
VCP-201ENST00000358901 SLC30A10Q6XR72 485 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 CDR2LQ86X02 465 aaPredicted RBP14.41□□□□□ -0.1
VCP-201ENST00000358901 NUDT12Q9BQG2 462 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 RIOX1Q9H6W3 641 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 PXDNQ92626 1479 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 CPA2P48052 419 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 CLMNQ96JQ2 1002 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 ANKEF1Q9NU02 776 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 INTS13Q9NVM9 706 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 KDM6AO15550 1401 aaPredicted RBP14.41□□□□□ -0.1
VCP-201ENST00000358901 NEMP1O14524 444 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 ARP10275 920 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 STMN1P16949 149 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 EEF1DP29692 281 aaKnown RBP14.41□□□□□ -0.1
VCP-201ENST00000358901 KDELC2Q7Z4H8 507 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 NDUFAF2Q8N183 169 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 TAAR1Q96RJ0 339 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 ING2Q9H160 280 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 BATF3Q9NR55 127 aa14.41□□□□□ -0.1
VCP-201ENST00000358901 ENO4A6NNW6 628 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 PPP1R12AO14974 1030 aaPredicted RBP14.4□□□□□ -0.1
VCP-201ENST00000358901 MYL3P08590 195 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 SNRPAP09012 282 aaKnown RBP14.4□□□□□ -0.1
VCP-201ENST00000358901 KRT4P19013 534 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 BRD2P25440 801 aaKnown RBP14.4□□□□□ -0.1
VCP-201ENST00000358901 RBP5P82980 135 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 OVGP1Q12889 678 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 MXD4Q14582 209 aaPredicted RBP14.4□□□□□ -0.1
VCP-201ENST00000358901 SEZ6Q53EL9 994 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 CYP4A22Q5TCH4 519 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 FAM71DQ8N9W8 422 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 C1orf131Q8NDD1 294 aaKnown RBP14.4□□□□□ -0.1
VCP-201ENST00000358901 CAVIN3Q969G5 261 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 RTFDC1Q9BY42 306 aaPredicted RBP14.4□□□□□ -0.1
VCP-201ENST00000358901 NIF3L1Q9GZT8 377 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 SEMA4AQ9H3S1 761 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 PPCSQ9HAB8 311 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 LRFN2Q9ULH4 789 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 ZNRF3Q9ULT6 936 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 LOC100653049A0A140TA62 436 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 KRT34O76011 436 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 SREBF1P36956 1147 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 ZNF677Q86XU0 584 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 LRRC71Q8N4P6 559 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 GIPC2Q8TF65 315 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 SLC20A1Q8WUM9 679 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 STAMBPL1Q96FJ0 436 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 PNMA5Q96PV4 448 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 FAM49BQ9NUQ9 324 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 SMIM22K7EJ46 135 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 EXTL3O43909 919 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 E2F6O75461 281 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 FAM153BP0C7A2 387 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 CYP11B1P15538 503 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 RRM1P23921 792 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 FAM153CQ494X1 144 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 MOXD1Q6UVY6 613 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 RIBC1Q8N443 379 aaPredicted RBP14.4□□□□□ -0.1
VCP-201ENST00000358901 TNIP3Q96KP6 325 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 MAGEB5Q9BZ81 275 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 TRIM15Q9C019 465 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 FAM153AQ9UHL3 310 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 PPME1Q9Y570 386 aa14.4□□□□□ -0.1
VCP-201ENST00000358901 KIDINS220Q9ULH0 1771 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 PDGFRBP09619 1106 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 SETSIPP0DME0 302 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 ZNF720Q7Z2F6 126 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms