RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 PGK2P07205 417 aa10.67□□□□□ -0.7
CLIP1-202ENST00000358808 C6orf222P0C671 652 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-202ENST00000358808 SPP2Q13103 211 aa10.67□□□□□ -0.7
CLIP1-202ENST00000358808 CCDC92Q53HC0 331 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-202ENST00000358808 CDR2LQ86X02 465 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-202ENST00000358808 CHSY1Q86X52 802 aa10.67□□□□□ -0.7
CLIP1-202ENST00000358808 OLFM3Q96PB7 478 aa10.67□□□□□ -0.7
CLIP1-202ENST00000358808 PRPF18Q99633 342 aaKnown RBP10.67□□□□□ -0.7
CLIP1-202ENST00000358808 NFKBIZQ9BYH8 718 aa10.67□□□□□ -0.7
CLIP1-202ENST00000358808 ZFYVE28Q9HCC9 887 aa10.67□□□□□ -0.7
CLIP1-202ENST00000358808 MINPP1Q9UNW1 487 aa10.67□□□□□ -0.7
CLIP1-202ENST00000358808 PLEKHG2Q9H7P9 1386 aa10.67□□□□□ -0.7
CLIP1-202ENST00000358808 FAM47DPA6NHR8 397 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 RNF103O00237 685 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 OR1G1P47890 313 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 EIF3EP60228 445 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 CCDC60Q8IWA6 550 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 CATSPER1Q8NEC5 780 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 OSBPL6Q9BZF3 934 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 FHDC1Q9C0D6 1143 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 PARVAQ9NVD7 372 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 PCDHB6Q9Y5E3 794 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 GUCY1A2P33402 732 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 HARS2P49590 506 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 ZNF746Q6NUN9 644 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 VPS37AQ8NEZ2 397 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 ALG13Q9NP73 1137 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 C2CD2LO14523 706 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 PEX1O43933 1283 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 TXNP10599 105 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 YWHAQP27348 245 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 CHI3L1P36222 383 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 USP10Q14694 798 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 PLCL1Q15111 1095 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 IFNEQ86WN2 208 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 COMMD2Q86X83 199 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 ANKMY2Q8IV38 441 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 SLC7A14Q8TBB6 771 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 POLD4Q9HCU8 107 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 HACL1Q9UJ83 578 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 ITSN1Q15811 1721 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 KIAA1210Q9ULL0 1709 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 P4HBP07237 508 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 ACADMP11310 421 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 QARSP47897 775 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 HIC1Q14526 733 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 RHOT1Q8IXI2 618 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 THAP11Q96EK4 314 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 BCL2L14Q9BZR8 327 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 SCN3BQ9NY72 215 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 EEF2KO00418 725 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 PRKCBP05771 671 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 MAPK9P45984 424 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 KIF23Q02241 960 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 TAP1Q03518 808 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 PTPN12Q05209 780 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 BTKQ06187 659 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 GSTA3Q16772 222 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 OSBP2Q969R2 916 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 ENTPD7Q9NQZ7 604 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 POLE3Q9NRF9 147 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 CRLS1Q9UJA2 301 aa10.66□□□□□ -0.7
CLIP1-202ENST00000358808 AGO2Q9UKV8 859 aaKnown RBP10.66□□□□□ -0.7
CLIP1-202ENST00000358808 POTEMA6NI47 508 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 TTLL13PA6NNM8 815 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 CYP21A2P08686 494 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 PBLDP30039 288 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 ST13P50502 369 aaKnown RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 AP3M2P53677 418 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 DEFA1P59665 94 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 DEFA3P59666 94 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 ARID5BQ14865 1188 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 DUOXA2Q1HG44 320 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 UNC13DQ70J99 1090 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 SH3BP5LQ7L8J4 393 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 DCP1BQ8IZD4 617 aaKnown RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 RNF149Q8NC42 400 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 RAD54LQ92698 747 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 MRPL1Q9BYD6 325 aaKnown RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 AAASQ9NRG9 546 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 APPL1Q9UKG1 709 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 FAM196BA6NMK8 535 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 ENO1P06733 434 aaKnown RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 CHRM3P20309 590 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 RGS7P49802 495 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 GUCY1A3Q02108 690 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 GFPT1Q06210 699 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 TMEM132BQ14DG7 1078 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 IZUMO3Q5VZ72 239 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 TRIM65Q6PJ69 517 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 CAMKK1Q8N5S9 505 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 TUBGCP3Q96CW5 907 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 FAM167BQ9BTA0 163 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 KRT84Q9NSB2 600 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 IPPQ9Y573 584 aa10.65□□□□□ -0.7
CLIP1-202ENST00000358808 RNASEH1O60930 286 aaKnown RBP10.65□□□□□ -0.7
CLIP1-202ENST00000358808 ITGA4P13612 1032 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms