RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 USP17L15C9J2P7 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L13C9JLJ4 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L11C9JVI0 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L18D6R9N7 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L22D6RA61 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L17D6RBQ6 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L19D6RCP7 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L20D6RJB6 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 MED24O75448 989 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 OATP04181 439 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 ALDH18A1P54886 795 aaKnown RBP12.07□□□□□ -0.48
CNOT3-202ENST00000358389 JAM2P57087 298 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L24Q0WX57 530 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 CDC16Q13042 620 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 RASA2Q15283 850 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 CBWD6Q4V339 395 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 CBWD3Q5JTY5 395 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 CBWD5Q5RIA9 395 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 LPCAT4Q643R3 524 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP17L6PQ6QN14 398 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 BRINP3Q76B58 766 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 USP37Q86T82 979 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 PSTPIP2Q9H939 334 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 LRRC4BQ9NT99 713 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 IL1RAPL1Q9NZN1 696 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 LRP6O75581 1613 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 CCDC195A0A1B0GUA6 201 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 ASLP04424 464 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 C2CD6Q53TS8 623 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 KLC3Q6P597 504 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 BBOF1Q8ND07 529 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 SHCBP1LQ9BZQ2 653 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
CNOT3-202ENST00000358389 SIGLEC16A6NMB1 481 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 I3L4J1 428 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 BTDP43251 543 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 GCLMP48507 274 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 PDIA2Q13087 525 aaKnown RBP12.06□□□□□ -0.48
CNOT3-202ENST00000358389 COG2Q14746 738 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 GSDMBQ8TAX9 411 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 RANBP17Q9H2T7 1088 aaKnown RBP12.06□□□□□ -0.48
CNOT3-202ENST00000358389 KLHL11Q9NVR0 708 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 ARHGEF38Q9NXL2 777 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 CYP26A1O43174 497 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 MAN1A1P33908 653 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 PLEKHG4Q58EX7 1191 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 HSP90AA5PQ58FG0 334 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 TCP10LQ8TDR4 215 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 GRID1Q9ULK0 1009 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 GJA3Q9Y6H8 435 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 MROH7Q68CQ1 1323 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 MEI4A8MW99 385 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 MAGEB3O15480 346 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 MT-ND3P03897 115 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 HOXA7P31268 230 aaPredicted RBP12.06□□□□□ -0.48
CNOT3-202ENST00000358389 HIRAP54198 1017 aaPredicted RBP12.06□□□□□ -0.48
CNOT3-202ENST00000358389 UBXN2AP68543 259 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 C11orf63Q6NUN7 778 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 FAM84BQ96KN1 310 aaPredicted RBP12.06□□□□□ -0.48
CNOT3-202ENST00000358389 GRIP2Q9C0E4 1043 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
CNOT3-202ENST00000358389 FGRP09769 529 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 RALAP11233 206 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 GPS1Q13098 491 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 PABPC1LQ4VXU2 614 aaKnown RBP12.05□□□□□ -0.48
CNOT3-202ENST00000358389 IYDQ6PHW0 289 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ALYREFQ86V81 257 aaKnown RBP12.05□□□□□ -0.48
CNOT3-202ENST00000358389 OR6Y1Q8NGX8 325 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 TTC25Q96NG3 672 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 PPM1HQ9ULR3 514 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 GINS2Q9Y248 185 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ZNF804BA4D1E1 1349 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 SORBS3O60504 671 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 SGPL1O95470 568 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 CLPTM1O96005 669 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ACAP1Q15027 740 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ERFEQ4G0M1 354 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 C1QTNF12Q5T7M4 302 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 GRAMD4Q6IC98 578 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 PALM2Q8IXS6 379 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 HAS1Q92839 578 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 NMUR2Q9GZQ4 415 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 R3HDM2Q9Y2K5 976 aaKnown RBP12.05□□□□□ -0.48
CNOT3-202ENST00000358389 MTO1Q9Y2Z2 717 aaKnown RBP12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ACTL7BQ9Y614 415 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ZMYM2Q9UBW7 1377 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 FAM237BA0A1B0GVD1 139 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 A8MXQ7 604 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 PENKP01210 267 aaPredicted RBP12.05□□□□□ -0.48
CNOT3-202ENST00000358389 BGNP21810 368 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 KLRK1P26718 216 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 FASTKD3Q14CZ7 662 aaKnown RBP12.05□□□□□ -0.48
CNOT3-202ENST00000358389 KCTD21Q4G0X4 260 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 RAPH1Q70E73 1250 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 CLEC10AQ8IUN9 316 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 LARGE2Q8N3Y3 721 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms