RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PI4K2AQ9BTU6 479 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 PLVAPQ9BX97 442 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 COQ4Q9Y3A0 265 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 MYO7AQ13402 2215 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 GTPBP10A4D1E9 387 aaKnown RBP16.39■□□□□ 0.21
TPM1-206ENST00000358278 TRAPPC3O43617 180 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 FGF18O76093 207 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 NOP14P78316 857 aaKnown RBP16.39■□□□□ 0.21
TPM1-206ENST00000358278 UBXN1Q04323 297 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 KRT17Q04695 432 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 EXOC3L4Q17RC7 722 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 EPC2Q52LR7 807 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 WDR44Q5JSH3 913 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 FUT10Q6P4F1 479 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 SPRED2Q7Z698 418 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 KLHL23Q8NBE8 558 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 BCL7CQ8WUZ0 217 aaPredicted RBP16.39■□□□□ 0.21
TPM1-206ENST00000358278 SEMA4DQ92854 862 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 SZT2Q5T011 3432 aa16.39■□□□□ 0.21
TPM1-206ENST00000358278 KPNA7A9QM74 516 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 I3L4J1 428 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 ASS1P00966 412 aaKnown RBP16.38■□□□□ 0.21
TPM1-206ENST00000358278 PAX3P23760 479 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 IGFBP6P24592 240 aaPredicted RBP16.38■□□□□ 0.21
TPM1-206ENST00000358278 BRCC3P46736 316 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 UBASH3AP57075 661 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 ERVK-21P61565 698 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 TNNC1P63316 161 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 ELAVL2Q12926 359 aaKnown RBP16.38■□□□□ 0.21
TPM1-206ENST00000358278 WDR72Q3MJ13 1102 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 ZNF667Q5HYK9 610 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 DSTYKQ6XUX3 929 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 FBXO22Q8NEZ5 403 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 TAF4BQ92750 862 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 C11orf84Q9BUA3 381 aaPredicted RBP16.38■□□□□ 0.21
TPM1-206ENST00000358278 XYLT2Q9H1B5 865 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 CERS4Q9HA82 394 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 SNX9Q9Y5X1 595 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 MYH10P35580 1976 aa16.38■□□□□ 0.21
TPM1-206ENST00000358278 A0A1B0GTH6 734 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 SPTLC1O15269 473 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 TPM3P06753 285 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 P4HA1P13674 534 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 TIGD5Q53EQ6 642 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 SPOPLQ6IQ16 392 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 ELMO3Q96BJ8 720 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 MMS19Q96T76 1030 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 INTS2Q9H0H0 1204 aaKnown RBP16.37■□□□□ 0.21
TPM1-206ENST00000358278 VRTNQ9H8Y1 702 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 RTN4Q9NQC3 1192 aaKnown RBP16.37■□□□□ 0.21
TPM1-206ENST00000358278 IFNKQ9P0W0 207 aa16.37■□□□□ 0.21
TPM1-206ENST00000358278 NXF1Q9UBU9 619 aaKnown RBP16.37■□□□□ 0.21
TPM1-206ENST00000358278 ARHGEF37A1IGU5 675 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 C5orf67F2Z3F1 127 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 LRRN2O75325 713 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 STAU1O95793 577 aaKnown RBP16.36■□□□□ 0.21
TPM1-206ENST00000358278 RB1P06400 928 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 AARSP49588 968 aaKnown RBP eCLIP16.36■□□□□ 0.21
TPM1-206ENST00000358278 LRMPQ12912 555 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 CD300LGQ6UXG3 332 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 ARNTL2Q8WYA1 636 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 SUSD3Q96L08 255 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 SENP8Q96LD8 212 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 NAP1L5Q96NT1 182 aaPredicted RBP16.36■□□□□ 0.21
TPM1-206ENST00000358278 NT5C1BQ96P26 610 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 GPR62Q9BZJ7 368 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 CYB561D2O14569 222 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 HUS1O60921 280 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 ODC1P11926 461 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 PLCB3Q01970 1234 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 FAM171A1Q5VUB5 890 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 TRIM65Q6PJ69 517 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 SCARA5Q6ZMJ2 495 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 DDX53Q86TM3 631 aaKnown RBP16.36■□□□□ 0.21
TPM1-206ENST00000358278 CEP57Q86XR8 500 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 EHBP1Q8NDI1 1231 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 PCMTD1Q96MG8 357 aaPredicted RBP16.36■□□□□ 0.21
TPM1-206ENST00000358278 ALG13Q9NP73 1137 aaKnown RBP16.36■□□□□ 0.21
TPM1-206ENST00000358278 GDAP2Q9NXN4 497 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
TPM1-206ENST00000358278 PUF60Q9UHX1 559 aaKnown RBP16.36■□□□□ 0.21
TPM1-206ENST00000358278 TEX33O43247 280 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 SLC9A1P19634 815 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 PON1P27169 355 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 SYCP1Q15431 976 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 PPM1KQ8N3J5 372 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 APPL2Q8NEU8 664 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 XPO4Q9C0E2 1151 aaKnown RBP16.35■□□□□ 0.21
TPM1-206ENST00000358278 NIF3L1Q9GZT8 377 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 APOBEC3GQ9HC16 384 aaKnown RBP16.35■□□□□ 0.21
TPM1-206ENST00000358278 POLIQ9UNA4 740 aa16.35■□□□□ 0.21
TPM1-206ENST00000358278 M0QZQ0 153 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 SOD2P04179 222 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 TKTP29401 623 aaKnown RBP16.34■□□□□ 0.21
TPM1-206ENST00000358278 GPM6BQ13491 265 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 USP41Q3LFD5 358 aa16.34■□□□□ 0.21
TPM1-206ENST00000358278 KIAA1841Q6NSI8 718 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms