RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 NBPF9Q3BBW0 867 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 PKN3Q6P5Z2 889 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 TRAPPC11Q7Z392 1133 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 OXER1Q8TDS5 423 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 HEMGNQ9BXL5 484 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 SENP6Q9GZR1 1112 aaPredicted RBP11.55□□□□□ -0.56
FN1-205ENST00000357867 ALDH8A1Q9H2A2 487 aaPredicted RBP11.55□□□□□ -0.56
FN1-205ENST00000357867 KLHL11Q9NVR0 708 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 PRG3Q9Y2Y8 225 aaPredicted RBP11.55□□□□□ -0.56
FN1-205ENST00000357867 ZNF521Q96K83 1311 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 CCDC85CA6NKD9 419 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 LRRIQ3A6PVS8 624 aaPredicted RBP11.55□□□□□ -0.56
FN1-205ENST00000357867 EEF2KO00418 725 aaKnown RBP11.55□□□□□ -0.56
FN1-205ENST00000357867 DYRK3O43781 588 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 HMOX2P30519 316 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 NDEL1Q9GZM8 345 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 A0A087WUV0 522 aaPredicted RBP11.55□□□□□ -0.56
FN1-205ENST00000357867 NPEPPSP55786 919 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 HERVK_113P62684 666 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 PTGISQ16647 500 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 PTRHD1Q6GMV3 140 aaKnown RBP11.55□□□□□ -0.56
FN1-205ENST00000357867 FBXO16Q8IX29 292 aaPredicted RBP11.55□□□□□ -0.56
FN1-205ENST00000357867 KIF2CQ99661 725 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 REEP2Q9BRK0 252 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 KRT82Q9NSB4 513 aa11.55□□□□□ -0.56
FN1-205ENST00000357867 F5H5T6 163 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 ZMYND10O75800 440 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 AVPR1AP37288 418 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 TMPRSS15P98073 1019 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 SPDYAQ5MJ70 313 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 IRAK1BP1Q5VVH5 260 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 C11orf57Q6ZUT1 292 aaPredicted RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 EPM2AIP1Q7L775 607 aaPredicted RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 C1QTNF7Q9BXJ2 289 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 MRPL9Q9BYD2 267 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 STX18Q9P2W9 335 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 A0A087WWV3 80 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 RASA1P20936 1047 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 GOLGA7BQ2TAP0 167 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 CHSY1Q86X52 802 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 GBP5Q96PP8 586 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 VPS11Q9H270 941 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 BAIAP2L1Q9UHR4 511 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 UBQLN1Q9UMX0 589 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 APOBEC2Q9Y235 224 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 NFRKBQ6P4R8 1299 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 ZNF438Q7Z4V0 828 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 PATL1Q86TB9 770 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 GIMAP4Q9NUV9 329 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 PPP1R9AQ9ULJ8 1098 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 ZMYM2Q9UBW7 1377 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 MFAP3LO75121 409 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 ESRRGP62508 458 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 KIRREL3Q8IZU9 778 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 GMCL1P1Q8NEA9 526 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 GMCL1Q96IK5 515 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 UTP6Q9NYH9 597 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 SPACA6W5XKT8 324 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 ATP1A1P05023 1023 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 PGK2P07205 417 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 IGFBP4P22692 258 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 UGP2Q16851 508 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 FASTKD1Q53R41 847 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 ZNF677Q86XU0 584 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 OSCP1Q8WVF1 389 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 C7orf25Q9BPX7 421 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 SPECC1L-ADORA2AF8WAN1 911 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 NMT1P30419 496 aaKnown RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 RFC1P35251 1148 aaPredicted RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 ETFBP38117 255 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 PPATQ06203 517 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 NBPF12Q5TAG4 269 aaPredicted RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 MAP1SQ66K74 1059 aaPredicted RBP11.54□□□□□ -0.56
FN1-205ENST00000357867 AGPAT1Q99943 283 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 TRIM55Q9BYV6 548 aa11.54□□□□□ -0.56
FN1-205ENST00000357867 LZTS3O60299 673 aaPredicted RBP11.53□□□□□ -0.56
FN1-205ENST00000357867 E2F6O75461 281 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 APRTP07741 180 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 SESN3P58005 492 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 GFPT1Q06210 699 aaPredicted RBP11.53□□□□□ -0.56
FN1-205ENST00000357867 CALML6Q8TD86 181 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 SNF8Q96H20 258 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 DNAJC7Q99615 494 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 PXMP2Q9NR77 195 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 LATS2Q9NRM7 1088 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 EVPLQ92817 2033 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 FKTNO75072 461 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 ITGB3P05106 788 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 RGS7P49802 495 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 EFTUD2Q15029 972 aaKnown RBP eCLIP11.53□□□□□ -0.562e-8■□□□□ 11.3
FN1-205ENST00000357867 PDK1Q15118 436 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 HIF1AQ16665 826 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 TMCO4Q5TGY1 634 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 ATP11CQ8NB49 1132 aa11.53□□□□□ -0.56
FN1-205ENST00000357867 IGDCC4Q8TDY8 1250 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms