RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 KARSQ15046 597 aaKnown RBP11.12□□□□□ -0.63
LINC01560-201ENST00000357412 KYAT1Q16773 422 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 ZNF528Q3MIS6 628 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 LARP1BQ659C4 914 aaKnown RBP11.12□□□□□ -0.63
LINC01560-201ENST00000357412 SLC39A4Q6P5W5 647 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 ZC3H14Q6PJT7 736 aaKnown RBP11.12□□□□□ -0.63
LINC01560-201ENST00000357412 ZNF852Q6ZMS4 543 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 ZNF687Q8N1G0 1237 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 MYCT1Q8N699 235 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 RAD54LQ92698 747 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 DNASE1L2Q92874 299 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 SMARCD2Q92925 531 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 CALML4Q96GE6 196 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 ZNF512Q96ME7 567 aaPredicted RBP11.12□□□□□ -0.63
LINC01560-201ENST00000357412 NELL2Q99435 816 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 LRRC3Q9BY71 257 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 DNAJC25Q9H1X3 360 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 PARVGQ9HBI0 331 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 ZFP14Q9HCL3 533 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 SPATA6Q9NWH7 488 aaPredicted RBP11.12□□□□□ -0.63
LINC01560-201ENST00000357412 CPSF3Q9UKF6 684 aaKnown RBP11.12□□□□□ -0.63
LINC01560-201ENST00000357412 FBXO4Q9UKT5 387 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 SMC3Q9UQE7 1217 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 MYO10Q9HD67 2058 aa11.12□□□□□ -0.63
LINC01560-201ENST00000357412 OR6C75A6NL08 312 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 K7ENM7 598 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 SPTLC1O15269 473 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 OGTO15294 1046 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 LAMTOR5O43504 91 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 FAM13AO94988 1023 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 MYL4P12829 197 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 TYMPP19971 482 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 SCP2P22307 547 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 LONP1P36776 959 aaKnown RBP11.11□□□□□ -0.63
LINC01560-201ENST00000357412 VIPR2P41587 438 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 MAGEA9P43362 315 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 RPS9P46781 194 aaKnown RBP11.11□□□□□ -0.63
LINC01560-201ENST00000357412 ID4P47928 161 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 GTF2BQ00403 316 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 FOXK2Q01167 660 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 GPR17Q13304 367 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 TEAD2Q15562 447 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 DSTYKQ6XUX3 929 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 TMC8Q8IU68 726 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 ELMOD1Q8N336 334 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 SUMF1Q8NBK3 374 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 LEMD2Q8NC56 503 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 SHKBP1Q8TBC3 707 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 PGLYRP2Q96PD5 576 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 TSPAN18Q96SJ8 248 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 TRMT61BQ9BVS5 477 aaKnown RBP11.11□□□□□ -0.63
LINC01560-201ENST00000357412 OXCT2Q9BYC2 517 aaPredicted RBP11.11□□□□□ -0.63
LINC01560-201ENST00000357412 RPF1Q9H9Y2 349 aaKnown RBP11.11□□□□□ -0.63
LINC01560-201ENST00000357412 TRPV4Q9HBA0 871 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 ASAH2Q9NR71 780 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 WDR81Q562E7 1941 aa11.11□□□□□ -0.63
LINC01560-201ENST00000357412 NCANO14594 1321 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 DENND4AQ7Z401 1863 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 ARNTLO00327 626 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 XPOTO43592 962 aaKnown RBP11.1□□□□□ -0.63
LINC01560-201ENST00000357412 BMP15O95972 392 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 NFICP08651 508 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 PSMC3P17980 439 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 NMT1P30419 496 aaKnown RBP11.1□□□□□ -0.63
LINC01560-201ENST00000357412 DDIT3P35638 169 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 LILRA4P59901 499 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 CSTF1Q05048 431 aaKnown RBP11.1□□□□□ -0.63
LINC01560-201ENST00000357412 DUSP4Q13115 394 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 MYBPC2Q14324 1141 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
LINC01560-201ENST00000357412 C9orf57Q5W0N0 161 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 OVOS1Q6IE37 1185 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 JADE1Q6IE81 842 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 CENPPQ6IPU0 288 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 VITQ6UXI7 678 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 BRAPQ7Z569 592 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 USP37Q86T82 979 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 CD302Q8IX05 232 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 ATAD1Q8NBU5 361 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 ZSCAN18Q8TBC5 510 aaPredicted RBP11.1□□□□□ -0.63
LINC01560-201ENST00000357412 DEPDC1BQ8WUY9 529 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 NELL1Q92832 810 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 RSPRY1Q96DX4 576 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 SENP8Q96LD8 212 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 TMEM209Q96SK2 561 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 MSTO1Q9BUK6 570 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 BRD9Q9H8M2 597 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 ZNF334Q9HCZ1 680 aaPredicted RBP11.1□□□□□ -0.63
LINC01560-201ENST00000357412 TRPV5Q9NQA5 729 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 SLC27A5Q9Y2P5 690 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 MRPS17Q9Y2R5 130 aaKnown RBP11.1□□□□□ -0.63
LINC01560-201ENST00000357412 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.1□□□□□ -0.63
LINC01560-201ENST00000357412 STYXL1Q9Y6J8 313 aa11.1□□□□□ -0.63
LINC01560-201ENST00000357412 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 ANO9A1A5B4 782 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 MTMR11A4FU01 709 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 TISP43B9A030 160 aa11.09□□□□□ -0.63
LINC01560-201ENST00000357412 ANKRD63C9JTQ0 380 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms