RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 NOP9Q86U38 636 aaKnown RBP13.24□□□□□ -0.29
BDNF-202ENST00000356660 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 SLC7A3Q8WY07 619 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 DDX27Q96GQ7 796 aaKnown RBP13.24□□□□□ -0.29
BDNF-202ENST00000356660 TUBB6Q9BUF5 446 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 APOL6Q9BWW8 343 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 COX16Q9P0S2 106 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 GTF3C4Q9UKN8 822 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 MYH7P12883 1935 aa13.24□□□□□ -0.29
BDNF-202ENST00000356660 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
BDNF-202ENST00000356660 FAM86B1E9PN63 330 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 FAM86B2P0C5J1 330 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 SMARCA1P28370 1054 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 PTGIRP43119 386 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 GRIK3Q13003 919 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 C11orf63Q6NUN7 778 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 TMEM270Q6UE05 265 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 C3orf62Q6ZUJ4 267 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 ZBTB33Q86T24 672 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 RTFDC1Q9BY42 306 aaPredicted RBP13.23□□□□□ -0.29
BDNF-202ENST00000356660 DENND2DQ9H6A0 471 aaPredicted RBP13.23□□□□□ -0.29
BDNF-202ENST00000356660 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
BDNF-202ENST00000356660 SPECC1L-ADORA2AF8WAN1 911 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 TGFB1I1O43294 461 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 ECE2O60344 883 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 ADRA1DP25100 572 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 CNGA1P29973 690 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 PRELPP51888 382 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 YARSP54577 528 aaKnown RBP13.23□□□□□ -0.29
BDNF-202ENST00000356660 PPP4CP60510 307 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 SPP2Q13103 211 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 PPP2R5CQ13362 524 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 HIF1AQ16665 826 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 MAP7D1Q3KQU3 841 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 KRT39Q6A163 491 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 HAUS6Q7Z4H7 955 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 CEP70Q8NHQ1 597 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 TTC25Q96NG3 672 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 MKNK1Q9BUB5 465 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 CALN1Q9BXU9 219 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 C12orf65Q9H3J6 166 aaKnown RBP13.23□□□□□ -0.29
BDNF-202ENST00000356660 MRPL47Q9HD33 250 aaKnown RBP13.23□□□□□ -0.29
BDNF-202ENST00000356660 SRGAP2CP0DJJ0 459 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 FOXN2P32314 431 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 PPATQ06203 517 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 DYNC1I2Q13409 638 aaKnown RBP13.23□□□□□ -0.29
BDNF-202ENST00000356660 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 RNF43Q68DV7 783 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 LLGL2Q6P1M3 1020 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 ARHGAP22Q7Z5H3 698 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 ADAM7Q9H2U9 754 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 LRCH1Q9Y2L9 728 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 COPEO14579 308 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 AHCYL1O43865 530 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 TJP3O95049 919 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 SERPINB3P29508 390 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 UCMAQ8WVF2 138 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 IFT122Q9HBG6 1241 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
BDNF-202ENST00000356660 CYP11B1P15538 503 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 AP2B1P63010 937 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 IZUMO2Q6UXV1 221 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 ZNF720Q7Z2F6 126 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 SLC51AQ86UW1 340 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 EZH1Q92800 747 aaPredicted RBP13.22□□□□□ -0.29
BDNF-202ENST00000356660 FAM84AQ96KN4 292 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 FAM111AQ96PZ2 611 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 RMDN3Q96TC7 470 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 FAM213AQ9BRX8 229 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 MANSC1Q9H8J5 431 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 PSMC3IPQ9P2W1 217 aaPredicted RBP13.22□□□□□ -0.29
BDNF-202ENST00000356660 PCDHA3Q9Y5H8 950 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 MAGEA13PA6NCF6 341 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 ETS2P15036 469 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 ARL4CP56559 192 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 ROR2Q01974 943 aaKnown RBP13.22□□□□□ -0.29
BDNF-202ENST00000356660 MPP2Q14168 576 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 Q3C1V9 767 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 RABGAP1LQ5R372 815 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 LGSNQ5TDP6 509 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 LRRC74BQ6ZQY2 392 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 TTLL6Q8N841 843 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 KIFC3Q9BVG8 833 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 TOPORSQ9NS56 1045 aaPredicted RBP13.22□□□□□ -0.29
BDNF-202ENST00000356660 SEL1LQ9UBV2 794 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 NCANO14594 1321 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 GPR75-ASB3A0A0A6YYF3 556 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 H7C0C1 242 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
BDNF-202ENST00000356660 NCF2P19878 526 aaPredicted RBP13.22□□□□□ -0.29
BDNF-202ENST00000356660 ATP5OP48047 213 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 PPP3CAQ08209 521 aa13.22□□□□□ -0.29
BDNF-202ENST00000356660 FBXL13Q8NEE6 735 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms