RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 UTYO14607 1347 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 SMAPO00193 183 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 FCER1AP12319 257 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 NQO1P15559 274 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 ACADSP16219 412 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 HSPA13P48723 471 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 KCNQ4P56696 695 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 OVGP1Q12889 678 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 RSBN1Q5VWQ0 802 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 C1orf131Q8NDD1 294 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 RFFLQ8WZ73 363 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 PTPRN2Q92932 1015 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 CCDC17Q96LX7 622 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 RBM15Q96T37 977 aaKnown RBP eCLIP11.54□□□□□ -0.563e-8■■■■■ 33.2
GTF3C1-201ENST00000356183 CAPN10Q9HC96 672 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 ZC3H7BQ9UGR2 993 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 RAD51CO43502 376 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 ASNA1O43681 348 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 WEE2P0C1S8 567 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 MLNP12872 115 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 TNFAIP2Q03169 654 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 PADI6Q6TGC4 694 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 CYB5R4Q7L1T6 521 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 TC2NQ8N9U0 490 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 BEST2Q8NFU1 509 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 MIEF2Q96C03 454 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 LRRC39Q96DD0 335 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 AP4S1Q9Y587 144 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 POTEFA5A3E0 1075 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 PP2D1A8MPX8 630 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM25AB3EWG3 89 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM25CB3EWG5 89 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM25GB3EWG6 89 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 ZNF197O14709 1029 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 LIFRP42702 1097 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 NME5P56597 212 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 KRR1Q13601 381 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 C12orf60Q5U649 245 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 POTEGQ6S5H5 508 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 FASTKD5Q7L8L6 764 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 KRT77Q7Z794 578 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 RCOR2Q8IZ40 523 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 C9orf72Q96LT7 481 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 DBNDD1Q9H9R9 158 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 INTS13Q9NVM9 706 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 IPPQ9Y573 584 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 EMSYQ7Z589 1322 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 HSMCR30P0CW71 290 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 CDK8P49336 464 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 IL31Q6EBC2 164 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 C11orf88Q6PI97 169 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 C3orf62Q6ZUJ4 267 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 SLC25A41Q8N5S1 370 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 NOL6Q9H6R4 1146 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 RBM12Q9NTZ6 932 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 IMPAD1Q9NX62 359 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 MCM8Q9UJA3 840 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 MAP3K15Q6ZN16 1313 aa11.54□□□□□ -0.56
GTF3C1-201ENST00000356183 USP17L5A8MUK1 530 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 RASGRF1Q13972 1273 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 MAPK11Q15759 364 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 AASDHQ4L235 1098 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 CHP1Q99653 195 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 CFAP74Q9C0B2 1584 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 ATP12AP54707 1039 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 TPI1P60174 286 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 OASLQ15646 514 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 PROSER3Q2NL68 480 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 ARHGAP27Q6ZUM4 889 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 PACS2Q86VP3 889 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 CENPLQ8N0S6 344 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 RAB42Q8N4Z0 105 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 UBASH3BQ8TF42 649 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 CELF4Q9BZC1 486 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 SEC31BQ9NQW1 1179 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 RAB6BQ9NRW1 208 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 BCORL1Q5H9F3 1711 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 C4BPBP20851 252 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 PSMA4P25789 261 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 ACTR2P61160 394 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 NFX1Q12986 1120 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 CYFIP1Q7L576 1253 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 NOA1Q8NC60 698 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 CSNK2BP67870 215 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 REXO1L1PQ8IX06 675 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 ASMTLO95671 621 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 JAK3P52333 1124 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 SHCBP1Q8NEM2 672 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 NARS2Q96I59 477 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 SRPK1Q96SB4 655 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 PNKPQ96T60 521 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 SENP7Q9BQF6 1050 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 KLHL4Q9C0H6 718 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
GTF3C1-201ENST00000356183 KANSL2Q9H9L4 492 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms