RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 EFHBQ8N7U6 833 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 RNF214Q8ND24 703 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 PPTC7Q8NI37 304 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 ANP32BQ92688 251 aaKnown RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 APBB2Q92870 758 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 FUCA2Q9BTY2 467 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 MAGEF1Q9HAY2 307 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 MAP3K20Q9NYL2 800 aaKnown RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 FBXO2Q9UK22 296 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 BARX2Q9UMQ3 279 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 PCDHA6Q9UN73 950 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 PLAGL2Q9UPG8 496 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 PCDHA8Q9Y5H6 950 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 NLRC5Q86WI3 1866 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 GVINP1Q7Z2Y8 2422 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 SMCO2A6NFE2 343 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 TREHO43280 583 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 C8AP07357 584 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 PFKFB1P16118 471 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 ATF7P17544 494 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-201ENST00000355766 HOXC8P31273 242 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 SYKP43405 635 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 CAMK1Q14012 370 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 IFI16Q16666 785 aaKnown RBP7.74□□□□□ -1.17
VPS13A-201ENST00000355766 QRICH1Q2TAL8 776 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 CT47A1Q5JQC4 288 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-201ENST00000355766 SEPT14Q6ZU15 432 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 PIK3AP1Q6ZUJ8 805 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 FRMD5Q7Z6J6 570 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 ADGRD2Q7Z7M1 963 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 ADSSL1Q8N142 457 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 GRIN3AQ8TCU5 1115 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 NKD2Q969F2 451 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-201ENST00000355766 RPGRIP1Q96KN7 1286 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 RIPOR3Q96MK2 946 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 EMILIN2Q9BXX0 1053 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 GTPBP4Q9BZE4 634 aaKnown RBP7.74□□□□□ -1.17
VPS13A-201ENST00000355766 OSBPL7Q9BZF2 842 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 RAB34Q9BZG1 259 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 CUEDC2Q9H467 287 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 CBX8Q9HC52 389 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 MBNL3Q9NUK0 354 aaKnown RBP7.74□□□□□ -1.17
VPS13A-201ENST00000355766 CACNA2D2Q9NY47 1150 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 ADAMTS6Q9UKP5 1117 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 PCDHB6Q9Y5E3 794 aa7.74□□□□□ -1.17
VPS13A-201ENST00000355766 FRMPD2Q68DX3 1309 aaPredicted RBP7.74□□□□□ -1.17
VPS13A-201ENST00000355766 DNAH14Q0VDD8 3507 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 hCG_1642624A0A1W2PR95 340 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 C17orf102A2RUQ5 167 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 BIN1O00499 593 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 TBX3O15119 743 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 KRT37O76014 449 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 CEACAM5P06731 702 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 RNASE1P07998 156 aaKnown RBP7.73□□□□□ -1.17
VPS13A-201ENST00000355766 CTSHP09668 335 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 MAPK1P28482 360 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 DEKP35659 375 aaKnown RBP7.73□□□□□ -1.17
VPS13A-201ENST00000355766 NRIP1P48552 1158 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 CEBPZQ03701 1054 aaKnown RBP7.73□□□□□ -1.17
VPS13A-201ENST00000355766 STX1AQ16623 288 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 SHC4Q6S5L8 630 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 HOMER1Q86YM7 354 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 TMEM105Q8N8V8 129 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 TRIML1Q8N9V2 468 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 SUSD6Q92537 303 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 P2RX5Q93086 422 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 ZNF689Q96CS4 500 aaPredicted RBP7.73□□□□□ -1.17
VPS13A-201ENST00000355766 BPIFA3Q9BQP9 254 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 NAT10Q9H0A0 1025 aaKnown RBP7.73□□□□□ -1.17
VPS13A-201ENST00000355766 GOLPH3LQ9H4A5 285 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 PSTPIP2Q9H939 334 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 EHMT1Q9H9B1 1298 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 ANO10Q9NW15 660 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 DDX41Q9UJV9 622 aaKnown RBP7.73□□□□□ -1.17
VPS13A-201ENST00000355766 KCNH3Q9ULD8 1083 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 PCDHA1Q9Y5I3 950 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
VPS13A-201ENST00000355766 KMT2BQ9UMN6 2715 aaPredicted RBP7.73□□□□□ -1.17
VPS13A-201ENST00000355766 ABCB11O95342 1321 aa7.73□□□□□ -1.17
VPS13A-201ENST00000355766 TRIP12Q14669 1992 aaPredicted RBP7.72□□□□□ -1.17
VPS13A-201ENST00000355766 CYP3A7-CYP3A51PA0A087WV96 503 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 NEMFO60524 1076 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 PPP1R11O60927 126 aaPredicted RBP7.72□□□□□ -1.17
VPS13A-201ENST00000355766 DTNBO60941 627 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 ZNF202O95125 648 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 ITGB1P05556 798 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 OR52Z1P0C646 297 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 BMP6P22004 513 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 CYP3A7P24462 503 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 DNAJB1P25685 340 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 CIITAP33076 1130 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 NDUFA8P51970 172 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 BTG3Q14201 252 aaPredicted RBP7.72□□□□□ -1.17
VPS13A-201ENST00000355766 STXBP2Q15833 593 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 NAALADL2Q58DX5 795 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 NT5DC1Q5TFE4 455 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 SASS6Q6UVJ0 657 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 FAM214BQ7L5A3 538 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 DGLUCYQ7Z3D6 616 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms