RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
NUDCD3-202ENST00000355451 HEMGNQ9BXL5 484 aa12.04□□□□□ -0.48
NUDCD3-202ENST00000355451 SMARCAL1Q9NZC9 954 aa12.04□□□□□ -0.48
NUDCD3-202ENST00000355451 CCDC85CA6NKD9 419 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 ZNF189O75820 626 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 UQCRBP14927 111 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 BNC1Q01954 994 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 TTLL9Q3SXZ7 439 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 TAF8Q7Z7C8 310 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 NDUFAF6Q330K2 333 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 RFX8Q6ZV50 586 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 DTNBP1Q96EV8 351 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 AP1M1Q9BXS5 423 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 PRRG3Q9BZD7 231 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 RAVER2Q9HCJ3 691 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 ZFATQ9P243 1243 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 ADAM30Q9UKF2 790 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 UHRF1BP1LA0JNW5 1464 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 DSG3P32926 999 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 CDKL3Q8IVW4 592 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 NACC2Q96BF6 587 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 MIR1-1HGQ9H1L0 117 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 CLEC4MQ9H2X3 399 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 DYRK1BQ9Y463 629 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 V9GYQ6 96 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 SFI1A8K8P3 1242 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 H7C0S8 307 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 GRIN3BO60391 1043 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 CPA3P15088 417 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 BHMT2Q9H2M3 363 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 WWP2O00308 870 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 RPS6KA5O75582 802 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 BBOX1O75936 387 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 PLA2G4BP0C869 781 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 CDC27P30260 824 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 EIF2S3P41091 472 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 RASGEF1AQ8N9B8 481 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 NSUN7Q8NE18 718 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 IP6K1Q92551 441 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 CIPCQ9C0C6 399 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 MIEF1Q9NQG6 463 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 PCDHB12Q9Y5F1 795 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 CLK3P49761 638 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 MARSP56192 900 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 POU4F1Q01851 419 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 IFNEQ86WN2 208 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 PIGOQ8TEQ8 1089 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 SLITRK2Q9H156 845 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 HAUS4Q9H6D7 363 aa12.03□□□□□ -0.48
NUDCD3-202ENST00000355451 LINC00854A0A1B0GVQ3 168 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 ARF3P61204 181 aaPredicted RBP12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 ARF1P84077 181 aaKnown RBP12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 ACTN3Q08043 901 aaPredicted RBP12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 RNF44Q7L0R7 432 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 CATSPER1Q8NEC5 780 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 BSDC1Q9NW68 430 aaPredicted RBP12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 KLHL20Q9Y2M5 609 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 ABCC1P33527 1531 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 M0R3G1 203 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 FTCDO95954 541 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 ALDH9A1P49189 494 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 ZNF284Q2VY69 593 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 DDI2Q5TDH0 399 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 UHRF1BP1Q6BDS2 1440 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 CCDC185Q8N715 623 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 NEK9Q8TD19 979 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 SERAC1Q96JX3 654 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 CNGB3Q9NQW8 809 aa12.02□□□□□ -0.48
NUDCD3-202ENST00000355451 ACADLP28330 430 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 CYFIP1Q7L576 1253 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 EPHX4Q8IUS5 362 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 C1QTNF7Q9BXJ2 289 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 CATSPERBQ9H7T0 1116 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 CTIFO43310 598 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 PGM3O95394 542 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 EGFRP00533 1210 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 SERPING1P05155 500 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 LYNP07948 512 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 SRSF11Q05519 484 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 OTOAQ7RTW8 1153 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 SH3GL1Q99961 368 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 ECSITQ9BQ95 431 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 ACTR2P61160 394 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 AP1S1P61966 158 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 GPSM2P81274 684 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 HIBCHQ6NVY1 386 aaPredicted RBP12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 APOA5Q6Q788 366 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 EPC1Q9H2F5 836 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 MEI4A8MW99 385 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 SERPINB1P30740 379 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 KCNQ4P56696 695 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 AASDHQ4L235 1098 aaPredicted RBP12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 SLC25A41Q8N5S1 370 aa12.02□□□□□ -0.49
NUDCD3-202ENST00000355451 ZNF112Q9UJU3 913 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms