RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ZNF844Q08AG5 666 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 MAP7Q14244 749 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 SNRNP35Q16560 246 aaKnown RBP13□□□□□ -0.33
COLCA1-201ENST00000355430 POLR3CQ9BUI4 534 aaPredicted RBP13□□□□□ -0.33
COLCA1-201ENST00000355430 OSBPL1AQ9BXW6 950 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 MAGED2Q9UNF1 606 aaPredicted RBP13□□□□□ -0.33
COLCA1-201ENST00000355430 USH1CQ9Y6N9 552 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 F8VZ95 297 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 GOLGA8RI6L899 631 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 CLGNO14967 610 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 PRKCBP05771 671 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 EPC2Q52LR7 807 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 ENOSF1Q7L5Y1 443 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 Q9H521 79 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 PCSK1NQ9UHG2 260 aa13□□□□□ -0.33
COLCA1-201ENST00000355430 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
COLCA1-201ENST00000355430 CDH16O75309 829 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 AP3M2P53677 418 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 ATN1P54259 1190 aaPredicted RBP12.99□□□□□ -0.33
COLCA1-201ENST00000355430 PSMC6P62333 389 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 SLC13A5Q86YT5 568 aaPredicted RBP12.99□□□□□ -0.33
COLCA1-201ENST00000355430 HTATIP2Q9BUP3 242 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 FAM129AQ9BZQ8 928 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 STRIP2Q9ULQ0 834 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 SPECC1L-ADORA2AF8WAN1 911 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 HOXC6P09630 235 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 VCAM1P19320 739 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 NCF2P19878 526 aaPredicted RBP12.99□□□□□ -0.33
COLCA1-201ENST00000355430 NPEPPSP55786 919 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 LONP2Q86WA8 852 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 CRLF3Q8IUI8 442 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 ZNF668Q96K58 619 aaPredicted RBP12.99□□□□□ -0.33
COLCA1-201ENST00000355430 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 SGPL1O95470 568 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 RAG1P15918 1043 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 SP3Q02447 781 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 CAPRIN2Q6IMN6 1127 aaKnown RBP12.99□□□□□ -0.33
COLCA1-201ENST00000355430 RFX8Q6ZV50 586 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 SEPT8Q92599 483 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 CCDC68Q9H2F9 335 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 CCDC85CA6NKD9 419 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 MSCO60682 206 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 FBXO25Q8TCJ0 367 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 TNFRSF25Q93038 417 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 ERP27Q96DN0 273 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 PARVAQ9NVD7 372 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 A0A0A6YYK5 440 aaPredicted RBP12.99□□□□□ -0.33
COLCA1-201ENST00000355430 F8W8V4 182 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 CASQ2O14958 399 aaPredicted RBP12.99□□□□□ -0.33
COLCA1-201ENST00000355430 KIAA0391O15091 583 aaKnown RBP12.99□□□□□ -0.33
COLCA1-201ENST00000355430 KRT37O76014 449 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 THPOP40225 353 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 FUT2Q10981 343 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 IRF2BP1Q8IU81 584 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 SMYD2Q9NRG4 433 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 TMX2Q9Y320 296 aa12.99□□□□□ -0.33
COLCA1-201ENST00000355430 KIF1CO43896 1103 aaKnown RBP12.98□□□□□ -0.33
COLCA1-201ENST00000355430 ANKRD20A8PQ5CZ79 823 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
COLCA1-201ENST00000355430 ATP11CQ8NB49 1132 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 TTC13Q8NBP0 860 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 HIPK4Q8NE63 616 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 NPHS2Q9NP85 383 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 KCND2Q9NZV8 630 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 FAM47DPA6NHR8 397 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 TBXAS1P24557 533 aaPredicted RBP12.98□□□□□ -0.33
COLCA1-201ENST00000355430 RPS6P62753 249 aaKnown RBP12.98□□□□□ -0.33
COLCA1-201ENST00000355430 ZNF662Q6ZS27 426 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 SLC20A1Q8WUM9 679 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 CAMKK2Q96RR4 588 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 SPATC1LQ9H0A9 340 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 G3BP2Q9UN86 482 aaKnown RBP12.98□□□□□ -0.33
COLCA1-201ENST00000355430 ITIH4Q14624 930 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 TRIM72Q6ZMU5 477 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 RAPH1Q70E73 1250 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 TMC3Q7Z5M5 1100 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 PPM1NQ8N819 430 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 CCNYQ8ND76 341 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 TTC1Q99614 292 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 MXRA8Q9BRK3 442 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 TRIM62Q9BVG3 475 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 NUF2Q9BZD4 464 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 KIAA1683Q9H0B3 1180 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 MYPNQ86TC9 1320 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 HIF1AQ16665 826 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 AFG1LQ8WV93 481 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 PI4K2AQ9BTU6 479 aa12.98□□□□□ -0.33
COLCA1-201ENST00000355430 MOV10L1Q9BXT6 1211 aaKnown RBP12.98□□□□□ -0.33
COLCA1-201ENST00000355430 RBAKQ9NYW8 714 aaPredicted RBP12.98□□□□□ -0.33
COLCA1-201ENST00000355430 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
COLCA1-201ENST00000355430 NRXN3Q9Y4C0 1643 aa12.97□□□□□ -0.33
COLCA1-201ENST00000355430 CAMTA1Q9Y6Y1 1673 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms