RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 ADRB2P07550 413 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 PYGMP11217 842 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 KRT5P13647 590 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 EIF4BP23588 611 aaKnown RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 POU5F1Q01860 360 aaKnown RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 CBX3Q13185 183 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 UGCGQ16739 394 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 LMBRD2Q68DH5 695 aaPredicted RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 ZDHHC14Q8IZN3 488 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 UBL4BQ8N7F7 174 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 XXYLT1Q8NBI6 393 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 LMO3Q8TAP4 145 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 ZNF653Q96CK0 615 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 PI4K2AQ9BTU6 479 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 MYLK2Q9H1R3 596 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 ZNF70Q9UC06 446 aaPredicted RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 NCANO14594 1321 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 SPDYE2BA6NHP3 402 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 TXNDC9O14530 226 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 CAPN9O14815 690 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 RASGRF2O14827 1237 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 SPDYE6P0CI01 402 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 ANXA13P27216 316 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 GJC1P36383 396 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 PSMC4P43686 418 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 RARRES1P49788 294 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 GPC5P78333 572 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 SEL1L2Q5TEA6 688 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 DAB2IPQ5VWQ8 1189 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 OR52E8Q6IFG1 317 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 LLGL2Q6P1M3 1020 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 RFWD3Q6PCD5 774 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 CCDC137Q6PK04 289 aaKnown RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 PRELID2Q8N945 189 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 STMN2Q93045 179 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 ERLEC1Q96DZ1 483 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 FAM118BQ9BPY3 351 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 SYT11Q9BT88 431 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 TMEM117Q9H0C3 514 aa9.93□□□□□ -0.82
SMG6-202ENST00000354901 DMAP1Q9NPF5 467 aaPredicted RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 ZNF277Q9NRM2 450 aaPredicted RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 HERC5Q9UII4 1024 aaKnown RBP9.93□□□□□ -0.82
SMG6-202ENST00000354901 ANKRD63C9JTQ0 380 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 VCAM1P19320 739 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 RPL21P46778 160 aaKnown RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 GALK1P51570 392 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 SPP2Q13103 211 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 LBRQ14739 615 aaKnown RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 TTC27Q6P3X3 843 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 TMEM110Q86TL2 294 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 MAP7D3Q8IWC1 876 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 SCYL3Q8IZE3 742 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 TTLL6Q8N841 843 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 C1orf54Q8WWF1 131 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 SEMA4DQ92854 862 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 RNF25Q96BH1 459 aaPredicted RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 ACCSQ96QU6 501 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 NAP1L3Q99457 506 aaPredicted RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 NUP85Q9BW27 656 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 RANBP17Q9H2T7 1088 aaKnown RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 ARHGEF38Q9NXL2 777 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 LRRC42Q9Y546 428 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 P4HBP07237 508 aaKnown RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 KIF22Q14807 665 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 KBTBD12Q3ZCT8 623 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 DUPD1Q68J44 220 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 OLFML1Q6UWY5 402 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 RHOT2Q8IXI1 618 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 RIBC1Q8N443 379 aaPredicted RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 GBP7Q8N8V2 638 aaPredicted RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 MPP4Q96JB8 637 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 KREMEN1Q96MU8 473 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 KIAA1683Q9H0B3 1180 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 DENND2DQ9H6A0 471 aaPredicted RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 TXLNGQ9NUQ3 528 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 CLIC5Q9NZA1 410 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 RASAL2Q9UJF2 1139 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 PHF24Q9UPV7 400 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 MAGEA13PA6NCF6 341 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 KIAA0391O15091 583 aaKnown RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 GNAZP19086 355 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 YWHABP31946 246 aaKnown RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 TGFB2P61812 414 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 MTMR1Q13613 665 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 CNGA2Q16280 664 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 C1orf220Q5T0J3 134 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 IRGCQ6NXR0 463 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 RBBP8NLQ8NC74 664 aaPredicted RBP9.92□□□□□ -0.82
SMG6-202ENST00000354901 ASAP3Q8TDY4 903 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 EPS8L1Q8TE68 723 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 HAUS1Q96CS2 278 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 TAAR1Q96RJ0 339 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 TBC1D10AQ9BXI6 508 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 ADAM7Q9H2U9 754 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 RXFP1Q9HBX9 757 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 STOML1Q9UBI4 398 aa9.92□□□□□ -0.82
SMG6-202ENST00000354901 CLDN3O15551 220 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 QARSP47897 775 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms