RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 LENG1Q96BZ8 264 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-201ENST00000352993 MTBPQ96DY7 904 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 R3HDM2Q9Y2K5 976 aaKnown RBP8.07□□□□□ -1.12
BRCA1-201ENST00000352993 ACTL7BQ9Y614 415 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 ZMYM2Q9UBW7 1377 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 TOGARAM1Q9Y4F4 1720 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 TRAFD1O14545 582 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 COQ9O75208 318 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 MYL2P10916 166 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 HARSP12081 509 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 SERPINB6P35237 376 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 MAGEA8P43361 318 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 EPHB1P54762 984 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 INHBCP55103 352 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 BTKQ06187 659 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 LSAMPQ13449 338 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 MTMR2Q13614 643 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 CYP1B1Q16678 543 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 GRAMD1BQ3KR37 738 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 MMEL1Q495T6 779 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 C2CD6Q53TS8 623 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 TMEM63BQ5T3F8 832 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 RIPOR1Q6ZS17 1223 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 TPH2Q8IWU9 490 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 SCUBE1Q8IWY4 988 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 SLC26A7Q8TE54 656 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 RABGAP1Q9Y3P9 1069 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF804BA4D1E1 1349 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ESYT2A0FGR8 921 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 GTPBP10A4D1E9 387 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 FCHO1O14526 889 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 RNASEH1O60930 286 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ITGA2BP08514 1039 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 RALAP11233 206 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 PTK6Q13882 451 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 RASA2Q15283 850 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 TTBK2Q6IQ55 1244 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 TCP10LQ8TDR4 215 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 PRPF31Q8WWY3 499 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 CNKSR2Q8WXI2 1034 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 KAT5Q92993 513 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 CCDC124Q96CT7 223 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 IWS1Q96ST2 819 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 IQCGQ9H095 443 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 EMSYQ7Z589 1322 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 MAGEB2O15479 319 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 KRT5P13647 590 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ATP6V1B1P15313 513 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ATF7P17544 494 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ABCD1P33897 745 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 MAGEA10P43363 369 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 KCNQ4P56696 695 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ASPHQ12797 758 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 CDC16Q13042 620 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 PDIA2Q13087 525 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 IKQ13123 557 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 FASTKD3Q14CZ7 662 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 SIX1Q15475 284 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 TBC1D10BQ4KMP7 808 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 RHBDF2Q6PJF5 856 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 KCTD1Q719H9 257 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ARHGEF19Q8IW93 802 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 FAM178BQ8IXR5 827 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 PYDC1Q8WXC3 89 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 CELF1Q92879 486 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 ELMO3Q96BJ8 720 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 TTC25Q96NG3 672 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 MAK16Q9BXY0 300 aaKnown RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 DCLK3Q9C098 648 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 KLHL11Q9NVR0 708 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 MARCOQ9UEW3 520 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 BLOC1S6Q9UL45 172 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 IKBKGQ9Y6K9 419 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 NUMBLQ9Y6R0 609 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 COL1A1P02452 1464 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-201ENST00000352993 KCPQ6ZWJ8 1503 aa8.06□□□□□ -1.12
BRCA1-201ENST00000352993 SPECC1L-ADORA2AF8WAN1 911 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 SORBS3O60504 671 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 ZSCAN5DPP0CG00 497 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 IL6STP40189 918 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 GPS1Q13098 491 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 PICALMQ13492 652 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 LPCAT4Q643R3 524 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 MORC4Q8TE76 937 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 PCDHB18PQ96TA0 734 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 PHACTR1Q9C0D0 580 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 RANBP17Q9H2T7 1088 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 KCNQ5Q9NR82 932 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 IL1RAPL1Q9NZN1 696 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 SENP1Q9P0U3 644 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 MTO1Q9Y2Z2 717 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 BRCA1P38398 1863 aaKnown RBP8.05□□□□□ -1.12
BRCA1-201ENST00000352993 A8MXQ7 604 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 TGFB1I1O43294 461 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 EDIL3O43854 480 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 BANF1O75531 89 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 FGFR1P11362 822 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 CD58P19256 250 aa8.05□□□□□ -1.12
BRCA1-201ENST00000352993 GALK1P51570 392 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms