RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 TRIM49P0CI25 452 aa15.02■□□□□ -0
SEC13-202ENST00000350697 TRIM49CP0CI26 452 aa15.02■□□□□ -0
SEC13-202ENST00000350697 TKTP29401 623 aaKnown RBP15.02■□□□□ -0
SEC13-202ENST00000350697 GTF2H1P32780 548 aa15.02■□□□□ -0
SEC13-202ENST00000350697 TYRO3Q06418 890 aa15.02■□□□□ -0
SEC13-202ENST00000350697 MYO1EQ12965 1108 aa15.02■□□□□ -0
SEC13-202ENST00000350697 BIRC3Q13489 604 aa15.02■□□□□ -0
SEC13-202ENST00000350697 TPD52L1Q16890 204 aaPredicted RBP15.02■□□□□ -0
SEC13-202ENST00000350697 CCDC40Q4G0X9 1142 aa15.02■□□□□ -0
SEC13-202ENST00000350697 TCEAL5Q5H9L2 206 aa15.02■□□□□ -0
SEC13-202ENST00000350697 RTP2Q5QGT7 225 aa15.02■□□□□ -0
SEC13-202ENST00000350697 C1orf220Q5T0J3 134 aa15.02■□□□□ -0
SEC13-202ENST00000350697 PDXDC1Q6P996 788 aa15.02■□□□□ -0
SEC13-202ENST00000350697 DSTYKQ6XUX3 929 aa15.02■□□□□ -0
SEC13-202ENST00000350697 RIN2Q8WYP3 895 aaPredicted RBP15.02■□□□□ -0
SEC13-202ENST00000350697 SENP8Q96LD8 212 aa15.02■□□□□ -0
SEC13-202ENST00000350697 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.02■□□□□ -05e-7■□□□□ 8.4
SEC13-202ENST00000350697 PCDHB8Q9UN66 801 aa15.02■□□□□ -0
SEC13-202ENST00000350697 ARHGEF37A1IGU5 675 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 KPNA7A9QM74 516 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 CCDC192P0DO97 292 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 MARSP56192 900 aaKnown RBP15.01□□□□□ -0.01
SEC13-202ENST00000350697 CREMQ03060 361 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 TRPC3Q13507 836 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 ZACNQ401N2 412 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 TCERG1LQ5VWI1 586 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 TDRD10Q5VZ19 366 aaKnown RBP15.01□□□□□ -0.01
SEC13-202ENST00000350697 SV2AQ7L0J3 742 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 ADGRD2Q7Z7M1 963 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 APPL2Q8NEU8 664 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 PIK3R5Q8WYR1 880 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 TLE6Q9H808 572 aa15.01□□□□□ -0.01
SEC13-202ENST00000350697 FSD2A1L4K1 749 aa15□□□□□ -0.01
SEC13-202ENST00000350697 CST3P01034 146 aaPredicted RBP15□□□□□ -0.01
SEC13-202ENST00000350697 ODC1P11926 461 aa15□□□□□ -0.01
SEC13-202ENST00000350697 TYMPP19971 482 aa15□□□□□ -0.01
SEC13-202ENST00000350697 GCLMP48507 274 aa15□□□□□ -0.01
SEC13-202ENST00000350697 PPP3CAQ08209 521 aa15□□□□□ -0.01
SEC13-202ENST00000350697 CCDC85BQ15834 202 aaPredicted RBP15□□□□□ -0.01
SEC13-202ENST00000350697 DCAF17Q5H9S7 520 aaPredicted RBP15□□□□□ -0.01
SEC13-202ENST00000350697 SCARA3Q6AZY7 606 aa15□□□□□ -0.01
SEC13-202ENST00000350697 C15orf39Q6ZRI6 1047 aa15□□□□□ -0.01
SEC13-202ENST00000350697 ANKS3Q6ZW76 656 aa15□□□□□ -0.01
SEC13-202ENST00000350697 MAFAQ8NHW3 353 aaPredicted RBP15□□□□□ -0.01
SEC13-202ENST00000350697 LNX1Q8TBB1 728 aaPredicted RBP15□□□□□ -0.01
SEC13-202ENST00000350697 HPDLQ96IR7 371 aa15□□□□□ -0.01
SEC13-202ENST00000350697 CDCA3Q99618 268 aaPredicted RBP15□□□□□ -0.01
SEC13-202ENST00000350697 EMILIN2Q9BXX0 1053 aa15□□□□□ -0.01
SEC13-202ENST00000350697 THAP9Q9H5L6 903 aa15□□□□□ -0.01
SEC13-202ENST00000350697 RXFP1Q9HBX9 757 aa15□□□□□ -0.01
SEC13-202ENST00000350697 TMEM8AQ9HCN3 771 aa15□□□□□ -0.01
SEC13-202ENST00000350697 FNIP2Q9P278 1114 aa15□□□□□ -0.01
SEC13-202ENST00000350697 SYCE3A1L190 88 aa15□□□□□ -0.01
SEC13-202ENST00000350697 CYB561D2O14569 222 aa15□□□□□ -0.01
SEC13-202ENST00000350697 NCK2O43639 380 aa15□□□□□ -0.01
SEC13-202ENST00000350697 STAU1O95793 577 aaKnown RBP15□□□□□ -0.01
SEC13-202ENST00000350697 CNPP09543 421 aaKnown RBP15□□□□□ -0.01
SEC13-202ENST00000350697 ATICP31939 592 aa15□□□□□ -0.01
SEC13-202ENST00000350697 NRIP1P48552 1158 aa15□□□□□ -0.01
SEC13-202ENST00000350697 MXI1P50539 228 aa15□□□□□ -0.01
SEC13-202ENST00000350697 NCOA4Q13772 614 aa15□□□□□ -0.01
SEC13-202ENST00000350697 PSMD5Q16401 504 aa15□□□□□ -0.01
SEC13-202ENST00000350697 VARS2Q5ST30 1063 aaKnown RBP15□□□□□ -0.01
SEC13-202ENST00000350697 KRT39Q6A163 491 aa15□□□□□ -0.01
SEC13-202ENST00000350697 PRSS55Q6UWB4 352 aaPredicted RBP15□□□□□ -0.01
SEC13-202ENST00000350697 C11orf57Q6ZUT1 292 aaPredicted RBP15□□□□□ -0.01
SEC13-202ENST00000350697 RBM23Q86U06 439 aaKnown RBP15□□□□□ -0.01
SEC13-202ENST00000350697 ENOX1Q8TC92 643 aaKnown RBP15□□□□□ -0.01
SEC13-202ENST00000350697 PPM1EQ8WY54 764 aa15□□□□□ -0.01
SEC13-202ENST00000350697 SLC35C1Q96A29 364 aa15□□□□□ -0.01
SEC13-202ENST00000350697 KLHL5Q96PQ7 755 aa15□□□□□ -0.01
SEC13-202ENST00000350697 NAT10Q9H0A0 1025 aaKnown RBP15□□□□□ -0.01
SEC13-202ENST00000350697 DNAJC25Q9H1X3 360 aa15□□□□□ -0.01
SEC13-202ENST00000350697 MMRN2Q9H8L6 949 aa15□□□□□ -0.01
SEC13-202ENST00000350697 GDAP2Q9NXN4 497 aa15□□□□□ -0.01
SEC13-202ENST00000350697 DSEQ9UL01 958 aa15□□□□□ -0.01
SEC13-202ENST00000350697 BRWD1Q9NSI6 2320 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 H7C4K7 107 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 PER2O15055 1255 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 TEX28O15482 410 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 VNN1O95497 513 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 CYP11A1P05108 521 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 PIK3CAP42336 1068 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 MYL6P60660 151 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 YWHAHQ04917 246 aaPredicted RBP14.99□□□□□ -0.01
SEC13-202ENST00000350697 HYAL1Q12794 435 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 MRPL58Q14197 206 aaKnown RBP14.99□□□□□ -0.01
SEC13-202ENST00000350697 DUSP6Q16828 381 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 ZNF280DQ6N043 979 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 FAM114A1Q8IWE2 563 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 TRIM59Q8IWR1 403 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 CNOT6LQ96LI5 555 aaKnown RBP14.99□□□□□ -0.01
SEC13-202ENST00000350697 XYLT2Q9H1B5 865 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 MTRRQ9UBK8 725 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 TIMM13Q9Y5L4 95 aaPredicted RBP14.99□□□□□ -0.01
SEC13-202ENST00000350697 SNX9Q9Y5X1 595 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 BACE2Q9Y5Z0 518 aa14.99□□□□□ -0.01
SEC13-202ENST00000350697 HUS1O60921 280 aa14.98□□□□□ -0.01
SEC13-202ENST00000350697 CLASP2O75122 1294 aaKnown RBP14.98□□□□□ -0.01
SEC13-202ENST00000350697 OAZ2O95190 189 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms