RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ZDHHC14Q8IZN3 488 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ACTRT2Q8TDY3 377 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 SYN2Q92777 582 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-203ENST00000349748 TRIM9Q9C026 710 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ZDHHC7Q9NXF8 308 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 RRN3Q9NYV6 651 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 DKK3Q9UBP4 350 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ADAMTS6Q9UKP5 1117 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 TOGARAM1Q9Y4F4 1720 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 B2RBV5 119 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 CYP26A1O43174 497 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 PHF2O75151 1096 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 TTLL1O95922 423 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 RARBP10826 455 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 CHRNB2P17787 502 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 PMLP29590 882 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 LONP1P36776 959 aaKnown RBP11.24□□□□□ -0.61
CAPN3-203ENST00000349748 PIK3CAP42336 1068 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ZNF568Q3ZCX4 644 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 CENPPQ6IPU0 288 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ZNF654Q8IZM8 581 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 C4orf33Q8N1A6 199 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 POU5F2Q8N7G0 328 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 PRELID2Q8N945 189 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ALG3Q92685 438 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 HGH1Q9BTY7 390 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 THTPAQ9BU02 230 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 SLC7A5P2Q9GIP4 190 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 SIAEQ9HAT2 523 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 SLC38A7Q9NVC3 462 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 FRMD4BQ9Y2L6 1034 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 AK5Q9Y6K8 562 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ADGRA3Q8IWK6 1321 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 LAMB4A4D0S4 1761 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 CIAO1O76071 339 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 PLEKHA8P1O95397 391 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 LDHCP07864 332 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 PABPC1P11940 636 aaKnown RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 ACTN1P12814 892 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 RPA3P35244 121 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 ACTR3P61158 418 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 GPR162Q16538 588 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 OGFOD2Q6N063 350 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 DCDC5Q6ZRR9 648 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 RGS9BPQ6ZS82 235 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 TRMT10CQ7L0Y3 403 aaKnown RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 FASTKD5Q7L8L6 764 aaKnown RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 TMC7Q7Z402 723 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 DHDDSQ86SQ9 333 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 BPHLQ86WA6 291 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 DDHD1Q8NEL9 900 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 GDPD5Q8WTR4 605 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 PYROXD1Q8WU10 500 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 C7orf43Q8WVR3 580 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 ART4Q93070 314 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 EDEM3Q9BZQ6 932 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 TMOD2Q9NZR1 351 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 SLC7A8Q9UHI5 535 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 CEPT1Q9Y6K0 416 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 A0A1B0GTW7 788 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 IQCA1LA6NCM1 817 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 FAM47E-STBD1D6RA91 191 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 F8W8V4 182 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 CSF1RP07333 972 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 MUTP22033 750 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 PON1P27169 355 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 RAP1GDS1P52306 607 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 SPARCL1Q14515 664 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 LRRC41Q15345 812 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 SLC1A5Q15758 541 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 SPDYAQ5MJ70 313 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 CCDC137Q6PK04 289 aaKnown RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 POTEHQ6S545 545 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 KIF6Q6ZMV9 814 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 SYNE4Q8N205 404 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 FAM172AQ8WUF8 416 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 BHMTQ93088 406 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 PRPF18Q99633 342 aaKnown RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 NRDE2Q9H7Z3 1164 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 ARHGEF4Q9NR80 690 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 UVRAGQ9P2Y5 699 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 ZNHIT2Q9UHR6 403 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 TTC7AQ9ULT0 858 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-203ENST00000349748 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
CAPN3-203ENST00000349748 A6NL46 340 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CIB2O75838 187 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PLCG1P19174 1290 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PDK4Q16654 411 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ARL13BQ3SXY8 428 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 PPP2R2DQ66LE6 453 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CCDC62Q6P9F0 684 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 LRRC55Q6ZSA7 311 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CPNE9Q8IYJ1 553 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 ULK2Q8IYT8 1036 aa11.22□□□□□ -0.61
CAPN3-203ENST00000349748 CENPSQ8N2Z9 138 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms