RNA–Protein interactions for RNA: ENST00000349299.7

H2AFV-203, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-203ENST00000349299 C9orf57Q5W0N0 161 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 DCLRE1AQ6PJP8 1040 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 USP37Q86T82 979 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 C1orf127Q8N9H9 656 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 OR5B17Q8NGF7 314 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 SPPL3Q8TCT6 385 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 ZNF516Q92618 1163 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 FAM84AQ96KN4 292 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 POP1Q99575 1024 aaKnown RBP10.48□□□□□ -0.73
H2AFV-203ENST00000349299 PRDM12Q9H4Q4 367 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 METTL14Q9HCE5 456 aaKnown RBP10.48□□□□□ -0.73
H2AFV-203ENST00000349299 ALG13Q9NP73 1137 aaKnown RBP10.48□□□□□ -0.73
H2AFV-203ENST00000349299 ADAM28Q9UKQ2 775 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 ITGA11Q9UKX5 1188 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 LZTS1Q9Y250 596 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
H2AFV-203ENST00000349299 CDH23Q9H251 3354 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 PTPRDP23468 1912 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 RFXAPO00287 272 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 PIRO00625 290 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 PPEF2O14830 753 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 GRM6O15303 877 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 B3GAT3O94766 335 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 GNA14O95837 355 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 ITGB3P05106 788 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 TRIM49P0CI25 452 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 TRIM49CP0CI26 452 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 POLR2BP30876 1174 aaKnown RBP10.47□□□□□ -0.73
H2AFV-203ENST00000349299 AP3M2P53677 418 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 C1orf220Q5T0J3 134 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 FUT10Q6P4F1 479 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 CD300LGQ6UXG3 332 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 Q7L0L9 218 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 TRAPPC11Q7Z392 1133 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 FRMD5Q7Z6J6 570 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 DDX53Q86TM3 631 aaKnown RBP10.47□□□□□ -0.73
H2AFV-203ENST00000349299 C3orf58Q8NDZ4 430 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 ENOX1Q8TC92 643 aaKnown RBP10.47□□□□□ -0.73
H2AFV-203ENST00000349299 HASPINQ8TF76 798 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 POF1BQ8WVV4 589 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 CNOT6LQ96LI5 555 aaKnown RBP10.47□□□□□ -0.73
H2AFV-203ENST00000349299 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 VN1R3Q9BXE9 311 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 LMAN2LQ9H0V9 348 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 STK39Q9UEW8 545 aa10.47□□□□□ -0.73
H2AFV-203ENST00000349299 ARMCX3Q9UH62 379 aaPredicted RBP10.47□□□□□ -0.73
H2AFV-203ENST00000349299 PUF60Q9UHX1 559 aaKnown RBP10.47□□□□□ -0.73
H2AFV-203ENST00000349299 SF3B1O75533 1304 aaKnown RBP eCLIP10.47□□□□□ -0.732e-6■■■■■ 55.3
H2AFV-203ENST00000349299 SZT2Q5T011 3432 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 IKBKBO14920 756 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 LPXNO60711 386 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 EFEMP2O95967 443 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 C4BPAP04003 597 aaKnown RBP10.46□□□□□ -0.73
H2AFV-203ENST00000349299 KRT19P08727 400 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 IGFBP6P24592 240 aaPredicted RBP10.46□□□□□ -0.73
H2AFV-203ENST00000349299 DNAJB1P25685 340 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 BRCC3P46736 316 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 TAF6P49848 677 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 MARSP56192 900 aaKnown RBP10.46□□□□□ -0.73
H2AFV-203ENST00000349299 MYL5Q02045 173 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 PPP3CAQ08209 521 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 TCERG1LQ5VWI1 586 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 TDRD10Q5VZ19 366 aaKnown RBP10.46□□□□□ -0.73
H2AFV-203ENST00000349299 SMYD5Q6GMV2 418 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 IRF2BP1Q8IU81 584 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 RNF168Q8IYW5 571 aaPredicted RBP10.46□□□□□ -0.73
H2AFV-203ENST00000349299 DEFB123Q8N688 67 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 CXorf38Q8TB03 319 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 ZNF560Q96MR9 790 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 BPIFA3Q9BQP9 254 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 HERC2P3Q9BVR0 1158 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 GPR62Q9BZJ7 368 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 NAT10Q9H0A0 1025 aaKnown RBP10.46□□□□□ -0.73
H2AFV-203ENST00000349299 THAP9Q9H5L6 903 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 TLR9Q9NR96 1032 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 SIX4Q9UIU6 781 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 AGAP1Q9UPQ3 857 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 NUB1Q9Y5A7 615 aa10.46□□□□□ -0.73
H2AFV-203ENST00000349299 TRAPPC3O43617 180 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 STX10O60499 249 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 RNF40O75150 1001 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 PHACTR2O75167 634 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 VNN1O95497 513 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 SOD2P04179 222 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 PAX3P23760 479 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 GTF2H1P32780 548 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 PNPLA4P41247 253 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 GCLMP48507 274 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 AARSP49588 968 aaKnown RBP eCLIP10.45□□□□□ -0.74
H2AFV-203ENST00000349299 LILRA4P59901 499 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 ERVFC1P60507 584 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 RBP5P82980 135 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 ELAVL2Q12926 359 aaKnown RBP10.45□□□□□ -0.74
H2AFV-203ENST00000349299 BIRC3Q13489 604 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 CAMK1Q14012 370 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 ZACNQ401N2 412 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 SV2CQ496J9 727 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 DCAF17Q5H9S7 520 aaPredicted RBP10.45□□□□□ -0.74
H2AFV-203ENST00000349299 SCARA3Q6AZY7 606 aa10.45□□□□□ -0.74
H2AFV-203ENST00000349299 C15orf39Q6ZRI6 1047 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms