RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 OTOFQ9HC10 1997 aa18.29■□□□□ 0.52
SMARCC2-202ENST00000347471 DICER1Q9UPY3 1922 aaKnown RBP18.29■□□□□ 0.52
SMARCC2-202ENST00000347471 IGKV6-21A0A0C4DH24 114 aa18.29■□□□□ 0.52
SMARCC2-202ENST00000347471 O00370 1275 aa18.29■□□□□ 0.52
SMARCC2-202ENST00000347471 ZC3H11AO75152 810 aaKnown RBP eCLIP18.29■□□□□ 0.523e-7■■■■□ 23
SMARCC2-202ENST00000347471 ASS1P00966 412 aaKnown RBP18.29■□□□□ 0.52
SMARCC2-202ENST00000347471 HEXIM2Q96MH2 286 aaKnown RBP18.29■□□□□ 0.52
SMARCC2-202ENST00000347471 ACAP3Q96P50 834 aa18.29■□□□□ 0.52
SMARCC2-202ENST00000347471 SMIM23A6NLE4 172 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 ASAP2O43150 1006 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 HAUS1Q96CS2 278 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 ZSWIM1Q9BR11 485 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 PARP14Q460N5 1801 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 DDX3YO15523 660 aaKnown RBP18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 ZBTB48P10074 688 aaPredicted RBP18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 CDCA2Q69YH5 1023 aaPredicted RBP18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 TSHZ1Q6ZSZ6 1077 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 ATG4AQ8WYN0 398 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 MCEEQ96PE7 176 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 UTP11Q9Y3A2 253 aaKnown RBP18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 PTPRFP10586 1907 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 MAP2K5Q13163 448 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 MAMDC4Q6UXC1 1216 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 ABRAQ8N0Z2 381 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 TAB3Q8N5C8 712 aaPredicted RBP18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 C7orf31Q8N865 590 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 UBA3Q8TBC4 463 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
SMARCC2-202ENST00000347471 HSF2BPO75031 334 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 PGK1P00558 417 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 PLTPP55058 493 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 RPL7AP62424 266 aaKnown RBP18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 TMEM132DQ14C87 1099 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 CFAP58Q5T655 872 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 C1orf127Q8N9H9 656 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 TSEN2Q8NCE0 465 aaKnown RBP18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 CXCL16Q9H2A7 254 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 PDZD7Q9H5P4 517 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 DNAJC17Q9NVM6 304 aaKnown RBP18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 ACO1P21399 889 aaKnown RBP18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 EPHB4P54760 987 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 RWDD2BP57060 319 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 FKBP1BP68106 108 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 TTC19Q6DKK2 380 aaPredicted RBP18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 MAF1Q9H063 256 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 HMGXB4Q9UGU5 601 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 HPCAL4Q9UM19 191 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 TNFSF13BQ9Y275 285 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 STXBP5LQ9Y2K9 1186 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 SNX9Q9Y5X1 595 aa18.27■□□□□ 0.52
SMARCC2-202ENST00000347471 DR1Q01658 176 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 PPP1R7Q15435 360 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 ATP13A4Q4VNC1 1196 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 GNASQ5JWF2 1037 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 DNAJC24Q6P3W2 148 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 ERICH1Q86X53 443 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 ACTRT1Q8TDG2 376 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 TFAP2BQ92481 460 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 TJP2Q9UDY2 1190 aa18.27■□□□□ 0.51
SMARCC2-202ENST00000347471 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 TREHO43280 583 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 PAPPA2Q9BXP8 1791 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 RNF40O75150 1001 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 GRAP2O75791 330 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 OR2W6PQ8NHA6 318 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 HPDLQ96IR7 371 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 EIF2AQ9BY44 585 aaKnown RBP18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 FAM49BQ9NUQ9 324 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 DOCK3Q8IZD9 2030 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 MAP2K7O14733 419 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 PMM2O15305 246 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 SURF1Q15526 300 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 IQSEC1Q6DN90 963 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 RGMBQ6NW40 437 aa18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 GCOM2Q9BZD3 368 aaPredicted RBP18.26■□□□□ 0.51
SMARCC2-202ENST00000347471 ATP8B1O43520 1251 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 KRT14P02533 472 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 YARSP54577 528 aaKnown RBP18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 SLC10A6Q3KNW5 377 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 RUFY4Q6ZNE9 571 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 EMC1Q8N766 993 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 NAP1L3Q99457 506 aaPredicted RBP18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 ARHGAP39Q9C0H5 1083 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 CARD9Q9H257 536 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 UVRAGQ9P2Y5 699 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 MTUS1Q9ULD2 1270 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 DAAM1Q9Y4D1 1078 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 SLC15A5A6NIM6 579 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 RGS7P49802 495 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 NOMO3P69849 1222 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 TSPAN1O60635 241 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 DYNLT1P63172 113 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 PLCB3Q01970 1234 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 CRHR2Q13324 411 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 SMTNL2Q2TAL5 461 aa18.25■□□□□ 0.51
SMARCC2-202ENST00000347471 FAM182AQ5T1J6 154 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms