RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CBWD2Q8IUF1 395 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 BRSK2Q8IWQ3 736 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 NELFCDQ8IXH7 590 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 BORCS6Q96GS4 357 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 POP1Q99575 1024 aaKnown RBP17.42■□□□□ 0.38
RAB5C-201ENST00000346213 CRISPLD1Q9H336 500 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 SLC39A2Q9NP94 309 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 ANO10Q9NW15 660 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 HCFC1R1Q9NWW0 138 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 BACE2Q9Y5Z0 518 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 PIRO00625 290 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 CYP3A5P20815 502 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 ELAVL2Q12926 359 aaKnown RBP17.41■□□□□ 0.38
RAB5C-201ENST00000346213 STK4Q13043 487 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 TMEM132DQ14C87 1099 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 SLC8B1Q6J4K2 584 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 CES5AQ6NT32 575 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 C15orf39Q6ZRI6 1047 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 SLC7A14Q8TBB6 771 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 ZNF507Q8TCN5 953 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 MYADMQ96S97 322 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 RTP3Q9BQQ7 232 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 CBX8Q9HC52 389 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 PCDHB13Q9Y5F0 798 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 DOCK6Q96HP0 2047 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 TECTAO75443 2155 aa17.41■□□□□ 0.38
RAB5C-201ENST00000346213 C8AP07357 584 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 MTHFRP42898 656 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 ZNF165P49910 485 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 SLFN12LQ6IEE8 588 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 KRBA2Q6ZNG9 492 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 C1orf127Q8N9H9 656 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 SMG7Q92540 1137 aaKnown RBP17.4■□□□□ 0.38
RAB5C-201ENST00000346213 DNAJC25Q9H1X3 360 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 PDE11AQ9HCR9 933 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 PCDHB8Q9UN66 801 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 NUB1Q9Y5A7 615 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 CLUHO75153 1309 aa17.4■□□□□ 0.38
RAB5C-201ENST00000346213 SYN3O14994 580 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 CCL16O15467 120 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 GARTP22102 1010 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 LILRA4P59901 499 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 ATAT1Q5SQI0 421 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 TTC9BQ8N6N2 239 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 OR5B17Q8NGF7 314 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 PLEKHO2Q8TD55 490 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 RIPOR3Q96MK2 946 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 PRKD2Q9BZL6 878 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 AGPAT3Q9NRZ7 376 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 SIX4Q9UIU6 781 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 SCN1AP35498 2009 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 NOTCH4Q99466 2003 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 CLIC2O15247 247 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 ABLIM3O94929 683 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 ARPP19P56211 112 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 CCDC142Q17RM4 750 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 KMT5BQ4FZB7 885 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 RNF19BQ6ZMZ0 732 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 ANKS3Q6ZW76 656 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 GRASPQ7Z6J2 395 aaPredicted RBP17.39■□□□□ 0.37
RAB5C-201ENST00000346213 OR10T2Q8NGX3 314 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 RSAD2Q8WXG1 361 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 NECTIN4Q96NY8 510 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 PLEKHA4Q9H4M7 779 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 ASB7Q9H672 318 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 MAGEF1Q9HAY2 307 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 WDR6Q9NNW5 1121 aaKnown RBP17.39■□□□□ 0.37
RAB5C-201ENST00000346213 RBAKQ9NYW8 714 aaPredicted RBP17.39■□□□□ 0.37
RAB5C-201ENST00000346213 C2CD2Q9Y426 696 aa17.39■□□□□ 0.37
RAB5C-201ENST00000346213 MTCL1Q9Y4B5 1905 aaKnown RBP17.38■□□□□ 0.37
RAB5C-201ENST00000346213 EIF3DO15371 548 aaKnown RBP eCLIP17.38■□□□□ 0.37
RAB5C-201ENST00000346213 HCRTO43612 131 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 EXTL3O43909 919 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 CREMQ03060 361 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 ALCAMQ13740 583 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 KYAT1Q16773 422 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 BMT2Q1RMZ1 405 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 ARMCX5Q6P1M9 558 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 SYCP3Q8IZU3 236 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 HDAC7Q8WUI4 952 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 ERCC4Q92889 916 aaPredicted RBP17.38■□□□□ 0.37
RAB5C-201ENST00000346213 TRIM44Q96DX7 344 aaPredicted RBP17.38■□□□□ 0.37
RAB5C-201ENST00000346213 SENP8Q96LD8 212 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 ZDHHC7Q9NXF8 308 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 DPP3Q9NY33 737 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 HSPBP1Q9NZL4 362 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 LIMD1Q9UGP4 676 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 USP25Q9UHP3 1055 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 HOOK1Q9UJC3 728 aaKnown RBP17.38■□□□□ 0.37
RAB5C-201ENST00000346213 DERAQ9Y315 318 aa17.38■□□□□ 0.37
RAB5C-201ENST00000346213 COL4A3Q01955 1670 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 TRAPPC3O43617 180 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 GPR37L1O60883 481 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 C1RP00736 705 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 PDGFBP01127 241 aaPredicted RBP17.37■□□□□ 0.37
RAB5C-201ENST00000346213 ABCD1P33897 745 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 NLRP12P59046 1061 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 ZXDAP98168 799 aa17.37■□□□□ 0.37
RAB5C-201ENST00000346213 IQCB1Q15051 598 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms