RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SAMSN1Q9NSI8 373 aaKnown RBP14.93□□□□□ -0.02
TPM4-202ENST00000344824 A0A0B4J269 797 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 XPOTO43592 962 aaKnown RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 SPATA31D3P0C874 917 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 HOXB8P17481 243 aaPredicted RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 TKTP29401 623 aaKnown RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 ZP2Q05996 745 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 LRRC63Q05C16 580 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 ZCWPW2Q504Y3 356 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 XKR4Q5GH76 650 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 DCLRE1AQ6PJP8 1040 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 TMC5Q6UXY8 1006 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 SPATA31D4Q6ZUB0 917 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 HS2ST1Q7LGA3 356 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 ADHFE1Q8IWW8 467 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 GJD3Q8N144 294 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 KCNN1Q92952 543 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 POP1Q99575 1024 aaKnown RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 PCIF1Q9H4Z3 704 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 CHST7Q9NS84 486 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 UBQLN1Q9UMX0 589 aaKnown RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 DOCK6Q96HP0 2047 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 TTC26A0AVF1 554 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 GOLGA8IPA6NC78 632 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 GOLGA8JA6NMD2 632 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 TMEM189-UBE2V1I3L0A0 370 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 PDXKO00764 312 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 TGFB1I1O43294 461 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 TRAPPC3O43617 180 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 FAM189A1O60320 539 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 LILRB3O75022 631 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 EFEMP2O95967 443 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 NFICP08651 508 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 CYP2J2P51589 502 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 CREMQ03060 361 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 CBX2Q14781 532 aaPredicted RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 JADE1Q6IE81 842 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 ARMCX5Q6P1M9 558 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 ELMSAN1Q6PJG2 1045 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 TMEM184AQ6ZMB5 413 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 SLC22A17Q8WUG5 538 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 RPGRIP1Q96KN7 1286 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 FAM213AQ9BRX8 229 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 SFXN1Q9H9B4 322 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 PLEKHA5Q9HAU0 1116 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 AGPAT3Q9NRZ7 376 aa14.92□□□□□ -0.02
TPM4-202ENST00000344824 CPSF3Q9UKF6 684 aaKnown RBP14.92□□□□□ -0.02
TPM4-202ENST00000344824 NR3C1P04150 777 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 ATP1A3P13637 1013 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 CDK11BP21127 795 aaKnown RBP14.91□□□□□ -0.02
TPM4-202ENST00000344824 NR2F2P24468 414 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 TMEM132DQ14C87 1099 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 BEST2Q8NFU1 509 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 PIK3R5Q8WYR1 880 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 CBWD1Q9BRT8 395 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 HSD3B7Q9H2F3 369 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 RXFP1Q9HBX9 757 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 CD320Q9NPF0 282 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 PRKAG3Q9UGI9 489 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 TRAF3IP3Q9Y228 551 aa14.91□□□□□ -0.02
TPM4-202ENST00000344824 TGM5O43548 720 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 ADSSP30520 456 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 RPL9P32969 192 aaKnown RBP14.9□□□□□ -0.02
TPM4-202ENST00000344824 FKBP3Q00688 224 aaKnown RBP14.9□□□□□ -0.02
TPM4-202ENST00000344824 ITIH3Q06033 890 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 ADAM9Q13443 819 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 UVSSAQ2YD98 709 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 CEP135Q66GS9 1140 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 PDXDC1Q6P996 788 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 CD302Q8IX05 232 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 ZSWIM2Q8NEG5 633 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 GOLGA5Q8TBA6 731 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 LNX1Q8TBB1 728 aaPredicted RBP14.9□□□□□ -0.02
TPM4-202ENST00000344824 FEZF2Q8TBJ5 459 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 RIPOR3Q96MK2 946 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 PHF7Q9BWX1 381 aaPredicted RBP14.9□□□□□ -0.02
TPM4-202ENST00000344824 S1PR5Q9H228 398 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 FNIP2Q9P278 1114 aa14.9□□□□□ -0.02
TPM4-202ENST00000344824 MAGEC2Q9UBF1 373 aaPredicted RBP14.9□□□□□ -0.02
TPM4-202ENST00000344824 KCNJ18B7U540 433 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 PPEF2O14830 753 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 CETN3O15182 167 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 FGFR1OPO95684 399 aaKnown RBP14.89□□□□□ -0.03
TPM4-202ENST00000344824 FGFR3P22607 806 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 MTHFRP42898 656 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 MRE11P49959 708 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 ARPP19P56211 112 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 KCNJ12Q14500 433 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 EDRF1Q3B7T1 1238 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 CCDC40Q4G0X9 1142 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 LIN9Q5TKA1 542 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 CD300LGQ6UXG3 332 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 SUSD6Q92537 303 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 CNOT6LQ96LI5 555 aaKnown RBP14.89□□□□□ -0.03
TPM4-202ENST00000344824 ADAM7Q9H2U9 754 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 POMKQ9H5K3 350 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 THAP9Q9H5L6 903 aa14.89□□□□□ -0.03
TPM4-202ENST00000344824 RBAKQ9NYW8 714 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms