RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 ERVK-10P10266 1014 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 HPGDP15428 266 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 FGFR4P22455 802 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 NMT1P30419 496 aaKnown RBP12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 GABPB1Q06547 395 aaPredicted RBP12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 KCNB1Q14721 858 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 IRAK1BP1Q5VVH5 260 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 BTN2A1Q7KYR7 527 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 PHACTR4Q8IZ21 702 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 CAMKK1Q8N5S9 505 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 MARCOQ9UEW3 520 aaPredicted RBP12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 IL10P22301 178 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 GTF2A2P52657 109 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 RBM23Q86U06 439 aaKnown RBP12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 FAM167BQ9BTA0 163 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 NMRK2Q9NPI5 230 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 BRAFP15056 766 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 TBXAS1P24557 533 aaPredicted RBP12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 FUT11Q495W5 492 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 CYP4A22Q5TCH4 519 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 TMC7Q7Z402 723 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 APPL1Q9UKG1 709 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 ESYT3A0FGR9 886 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 SERPINB4P48594 390 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 TP53BP2Q13625 1128 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 NT5DC4Q86YG4 428 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 EXO5Q9H790 373 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 SLC39A10Q9ULF5 831 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 PITPNM2Q9BZ72 1349 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 SYNCRIPO60506 623 aaKnown RBP12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 APOA1P02647 267 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 RALBP11234 206 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 FGFR1P11362 822 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 LRRC63Q05C16 580 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 HDDC2Q7Z4H3 204 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 STN1Q9H668 368 aaKnown RBP12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 ARHGEF38Q9NXL2 777 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 MAP3K4Q9Y6R4 1608 aa12.83□□□□□ -0.36
TRIOBP-202ENST00000344404 KLHL18O94889 574 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 ADCY2Q08462 1091 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 CENPPQ6IPU0 288 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 RNASE11Q8TAA1 199 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 MAP4K1Q92918 833 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 ENO1P06733 434 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 NCAM1P13591 858 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 YWHAZP63104 245 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 LUZP2Q86TE4 346 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 TBC1D10CQ8IV04 446 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 RHOT2Q8IXI1 618 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 PTPRN2Q92932 1015 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 MCEEQ96PE7 176 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 CIPCQ9C0C6 399 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 FBXO10Q9UK96 956 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 AATKQ6ZMQ8 1374 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 NFICP08651 508 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 MLH1P40692 756 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 APBA1Q02410 837 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 FBXO16Q8IX29 292 aaPredicted RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 ACSF2Q96CM8 615 aaPredicted RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 MIR1-1HGQ9H1L0 117 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 CERS4Q9HA82 394 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 CSDE1O75534 798 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 TRIM16O95361 564 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 MAGOHP61326 146 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 AP2B1P63010 937 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 NFRKBQ6P4R8 1299 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 LAYNQ6UX15 382 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 CCDC81Q6ZN84 652 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 FLCNQ8NFG4 579 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 TMEM60Q9H2L4 133 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 RNPEPQ9H4A4 650 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 KIAA1586Q9HCI6 787 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■■□□□ 12.6
TRIOBP-202ENST00000344404 BFARQ9NZS9 450 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 NDOR1Q9UHB4 597 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 PRR12Q9ULL5 1215 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 CASTOR2A6NHX0 329 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 EEF2KO00418 725 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 AKAP10O43572 662 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 TSC22D2O75157 780 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 WEE2P0C1S8 567 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 KDSRQ06136 332 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 USP39Q53GS9 565 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 UXS1Q8NBZ7 420 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 PARVAQ9NVD7 372 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 hCG_1984214I3L0E3 225 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 FEN1P39748 380 aaKnown RBP12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 AP3B2Q13367 1082 aa12.82□□□□□ -0.36
TRIOBP-202ENST00000344404 ARID5BQ14865 1188 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms