RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 LPXNO60711 386 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 CDH16O75309 829 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 ITGB3P05106 788 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 PRLRP16471 622 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 HSPA9P38646 679 aaKnown RBP12.62□□□□□ -0.39
CDH5-201ENST00000341529 SLC12A1Q13621 1099 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 SURF1Q15526 300 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 ACAD10Q6JQN1 1059 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 ENOSF1Q7L5Y1 443 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 NSMCE1Q8WV22 266 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 TTC1Q99614 292 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 CDC42EP4Q9H3Q1 356 aaKnown RBP12.62□□□□□ -0.39
CDH5-201ENST00000341529 ASTN1O14525 1302 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 PRRC2BQ5JSZ5 2229 aaKnown RBP12.62□□□□□ -0.39
CDH5-201ENST00000341529 IQANK1A0A1B0GTG1 560 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 KRT7P08729 469 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 TPD52P55327 224 aaPredicted RBP12.62□□□□□ -0.39
CDH5-201ENST00000341529 CORO7P57737 925 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 ATP13A4Q4VNC1 1196 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 TMCO4Q5TGY1 634 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 C1orf186Q6ZWK4 172 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 FAM167AQ96KS9 214 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 AGO4Q9HCK5 861 aaKnown RBP12.62□□□□□ -0.39
CDH5-201ENST00000341529 METTL5Q9NRN9 209 aaKnown RBP12.62□□□□□ -0.39
CDH5-201ENST00000341529 ZFP69BQ9UJL9 534 aa12.62□□□□□ -0.39
CDH5-201ENST00000341529 GPC4O75487 556 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 ROR1Q01973 937 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 KDSRQ06136 332 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 CUL2Q13617 745 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 TTMPQ5BVD1 217 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 FBXO16Q8IX29 292 aaPredicted RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 HACE1Q8IYU2 909 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 RARAP10276 462 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 RPL21P46778 160 aaKnown RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 MOXD1Q6UVY6 613 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 LNX1Q8TBB1 728 aaPredicted RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 CCHCR1Q8TD31 782 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 AENQ8WTP8 325 aaKnown RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 CHST7Q9NS84 486 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 PIH1D1Q9NWS0 290 aaKnown RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 KCND2Q9NZV8 630 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 PIN4Q9Y237 131 aaKnown RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 TGFB1I1O43294 461 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 AGTP01019 485 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 ZSCAN5DPP0CG00 497 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 BACE1P56817 501 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 RNASELQ05823 741 aaKnown RBP12.61□□□□□ -0.39
CDH5-201ENST00000341529 SH2D4BQ5SQS7 431 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 ATF7IP2Q5U623 682 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 PID1Q7Z2X4 250 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 RNF135Q8IUD6 432 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 PARP9Q8IXQ6 854 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 ATP11CQ8NB49 1132 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 GMCL1P1Q8NEA9 526 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 FEZF2Q8TBJ5 459 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 LRRN4Q8WUT4 740 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 UBN1Q9NPG3 1134 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 TXLNGQ9NUQ3 528 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 ATRNO75882 1429 aa12.61□□□□□ -0.39
CDH5-201ENST00000341529 SPDYE16A6NNV3 312 aaPredicted RBP12.6□□□□□ -0.39
CDH5-201ENST00000341529 EXTL3O43909 919 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 HUS1O60921 280 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 OATP04181 439 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 ATXN3P54252 364 aaPredicted RBP12.6□□□□□ -0.39
CDH5-201ENST00000341529 LY6KQ17RY6 165 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 HEATR6Q6AI08 1181 aaKnown RBP12.6□□□□□ -0.39
CDH5-201ENST00000341529 CCNYL1Q8N7R7 359 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 USP33Q8TEY7 942 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 PXMP2Q9NR77 195 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 SLC5A4Q9NY91 659 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 CTNNAL1Q9UBT7 734 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 TLK1Q9UKI8 766 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 STRIP2Q9ULQ0 834 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 FANCGO15287 622 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 DIAPH2O60879 1101 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 VTNP04004 478 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 ADRB2P07550 413 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 ITIH2P19823 946 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 ZNF844Q08AG5 666 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 PGM5Q15124 567 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 LRRC36Q1X8D7 754 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 RASIP1Q5U651 963 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 MOB2Q70IA6 237 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 PDZD4Q76G19 769 aaPredicted RBP12.6□□□□□ -0.39
CDH5-201ENST00000341529 PARD3BQ8TEW8 1205 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 MYCBPQ99417 103 aaPredicted RBP12.6□□□□□ -0.39
CDH5-201ENST00000341529 GANQ9H2C0 597 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 ANKEF1Q9NU02 776 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 NPTXRO95502 500 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 FLT3P36888 993 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 MMEL1Q495T6 779 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 APOBEC3FQ8IUX4 373 aaKnown RBP12.6□□□□□ -0.39
CDH5-201ENST00000341529 ACTRT1Q8TDG2 376 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 RMDN2Q96LZ7 410 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
CDH5-201ENST00000341529 KCTD10Q9H3F6 313 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms