RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 STMN2Q93045 179 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 ARHGEF26Q96DR7 871 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 DNAJC1Q96KC8 554 aaKnown RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 OLFM3Q96PB7 478 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 BTBD10Q9BSF8 475 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 GRID1Q9ULK0 1009 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 PCDHA12Q9UN75 941 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 TCRBV7S2A1N4TA0A589 114 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 RNASEH1O60930 286 aaKnown RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 GRIA2P42262 883 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 HPCAP84074 193 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 CBX3Q13185 183 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 SPDYAQ5MJ70 313 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 SH2D4BQ5SQS7 431 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 CCDC174Q6PII3 467 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 DNAJC14Q6Y2X3 702 aaPredicted RBP16.26■□□□□ 0.19
LIMK2-203ENST00000340552 NLRP9Q7RTR0 991 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 CRYGNQ8WXF5 182 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 RAD54LQ92698 747 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 KRT35Q92764 455 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 ZNF341Q9BYN7 854 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 SAR1AQ9NR31 198 aa16.26■□□□□ 0.19
LIMK2-203ENST00000340552 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 CYP3A7-CYP3A51PA0A087WV96 503 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 RBM47A0AV96 593 aaKnown RBP16.25■□□□□ 0.19
LIMK2-203ENST00000340552 FAM47DPA6NHR8 397 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 SPAG7O75391 227 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 TTC4O95801 387 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 CYP3A7P24462 503 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 HOXA13P31271 388 aaPredicted RBP16.25■□□□□ 0.19
LIMK2-203ENST00000340552 SLC45A4Q5BKX6 768 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 CYFIP1Q7L576 1253 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 CCDC105Q8IYK2 499 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 NMD3Q96D46 503 aaKnown RBP16.25■□□□□ 0.19
LIMK2-203ENST00000340552 UIMC1Q96RL1 719 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 LGALS13Q9UHV8 139 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 CCDC22O60826 627 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 CHRNB2P17787 502 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 SERPINB3P29508 390 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 MAP7Q14244 749 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 MOXD1Q6UVY6 613 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 PRUNE1Q86TP1 453 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 FAM160B2Q86V87 743 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 GLYCTKQ8IVS8 523 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 UPF1Q92900 1129 aaKnown RBP eCLIP16.25■□□□□ 0.19
LIMK2-203ENST00000340552 DEFB129Q9H1M3 183 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 TSPYL2Q9H2G4 693 aaPredicted RBP16.25■□□□□ 0.19
LIMK2-203ENST00000340552 RANBP17Q9H2T7 1088 aaKnown RBP16.25■□□□□ 0.19
LIMK2-203ENST00000340552 FBXO28Q9NVF7 368 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 ARL8BQ9NVJ2 186 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 COG5Q9UP83 839 aa16.25■□□□□ 0.19
LIMK2-203ENST00000340552 SYNGAP1Q96PV0 1343 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 PLA2G6O60733 806 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 GFPT2O94808 682 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 OR6B1O95007 311 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 FUT4P22083 530 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 ANXA13P27216 316 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 JAM2P57087 298 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 CALCOCO2Q13137 446 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 FAM26FQ5R3K3 315 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 SLC30A5Q8TAD4 765 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 DNAJC19Q96DA6 116 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 CLMNQ96JQ2 1002 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 MBOAT7Q96N66 472 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 UBN1Q9NPG3 1134 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 IL1RAPL1Q9NZN1 696 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 TMEM253P0C7T8 217 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 AMPD1P23109 780 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 SREBF1P36956 1147 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 COILP38432 576 aaPredicted RBP16.24■□□□□ 0.19
LIMK2-203ENST00000340552 THOC5Q13769 683 aaKnown RBP16.24■□□□□ 0.19
LIMK2-203ENST00000340552 RFX8Q6ZV50 586 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 ABTB1Q969K4 478 aaPredicted RBP16.24■□□□□ 0.19
LIMK2-203ENST00000340552 SLC35B4Q969S0 331 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 IQCGQ9H095 443 aaKnown RBP16.24■□□□□ 0.19
LIMK2-203ENST00000340552 FEM1BQ9UK73 627 aa16.24■□□□□ 0.19
LIMK2-203ENST00000340552 RASA4BC9J798 803 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 PIK3CDO00329 1044 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 RASA4O43374 803 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 MUTP22033 750 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 SH3BGRP55822 239 aaPredicted RBP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 DSG1Q02413 1049 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 CLUL1Q15846 466 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 PRR16Q569H4 304 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 PLEKHG4Q58EX7 1191 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 ST13P4Q8IZP2 240 aaPredicted RBP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 ZBTB8BQ8NAP8 495 aaPredicted RBP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 CTNNBL1Q8WYA6 563 aaPredicted RBP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 PTCD3Q96EY7 689 aaKnown RBP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 ECSITQ9BQ95 431 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 SIX2Q9NPC8 291 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 CYLDQ9NQC7 956 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 CLIC5Q9NZA1 410 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 C2CD2LO14523 706 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 HNRNPCL1O60812 293 aaKnown RBP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 TCEA3O75764 348 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 CFBP00751 764 aa16.23■□□□□ 0.19
LIMK2-203ENST00000340552 HNRNPCP07910 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
LIMK2-203ENST00000340552 HSPA6P17066 643 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms