RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 FAM76AQ8TAV0 307 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 HNRNPLLQ8WVV9 542 aaKnown RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 DNAJB3Q8WWF6 145 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 FBXL18Q96ME1 805 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 TINF2Q9BSI4 451 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 NIF3L1Q9GZT8 377 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 SNTG2Q9NY99 539 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 GTF3C4Q9UKN8 822 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 M0QYV0 167 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 TNPO2O14787 897 aaKnown RBP10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 DDX3YO15523 660 aaKnown RBP10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 TUBBP07437 444 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 PDGFRBP09619 1106 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 CYP2C9P11712 490 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 CCDC62Q6P9F0 684 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 TAX1BP1Q86VP1 789 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 ERICH1Q86X53 443 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 HES6Q96HZ4 224 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 LPIN3Q9BQK8 851 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 C2orf40Q9H1Z8 148 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 CXCL16Q9H2A7 254 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 SNX9Q9Y5X1 595 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 ACKR2O00590 384 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 SNAI1O95863 264 aaPredicted RBP10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 KRT1P04264 644 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 GCNT1Q02742 428 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 KRT71Q3SY84 523 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 KCNV1Q6PIU1 500 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 JPH2Q9BR39 696 aaPredicted RBP10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 RNF14Q9UBS8 474 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 KCNG1Q9UIX4 513 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 DOCK3Q8IZD9 2030 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 ADCY6O43306 1168 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 RTP1P59025 263 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 BPIFB4P59827 614 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 SNRPFP62306 86 aaKnown RBP10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 AENQ8WTP8 325 aaKnown RBP10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 LRRN4Q8WUT4 740 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 MAML3Q96JK9 1138 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 CDHR5Q9HBB8 845 aa10.82□□□□□ -0.68
RBFOX1-202ENST00000340209 NCANO14594 1321 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 HCRTO43612 131 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 C22orf31O95567 290 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 RALAP11233 206 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 DMTNQ08495 405 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 OLIG1Q8TAK6 271 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 FAM71BQ8TC56 605 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 TFAP2BQ92481 460 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 PWWP2AQ96N64 755 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 MIS12Q9H081 205 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 ISCUQ9H1K1 167 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 GOLGA2P5Q9HBQ8 144 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 MBTD1Q05BQ5 628 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 PDCLQ13371 301 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 LDLRAD1Q5T700 205 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 SPRYD7Q5W111 196 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 TAPT1Q6NXT6 567 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 JAMLQ86YT9 394 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 C12orf29Q8N999 325 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 HSPH1Q92598 858 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 NAP1L3Q99457 506 aaPredicted RBP10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 SAE1Q9UBE0 346 aaPredicted RBP10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 RSPH14Q9UHP6 348 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 RASAL2Q9UJF2 1139 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 INTUQ9ULD6 942 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 CNTNAP2Q9UHC6 1331 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 IGKV6D-21A0A0A0MT36 114 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 A0A0A6YYK5 440 aaPredicted RBP10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 F8VP50 259 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 GRIN3BO60391 1043 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 ACSL3O95573 720 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 PTENP60484 403 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 PSMC1P62191 440 aaKnown RBP10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 ATP11AP98196 1134 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 TMEM132DQ14C87 1099 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 DGKDQ16760 1214 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 DENND1BQ6P3S1 775 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 OR6B3Q8NGW1 331 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 ACTRT1Q8TDG2 376 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 L3MBTL3Q96JM7 780 aaPredicted RBP10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 MS4A4AQ96JQ5 239 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 FMO2Q99518 471 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 CHST7Q9NS84 486 aa10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.81□□□□□ -0.68
RBFOX1-202ENST00000340209 DNAJC25-GNG10A0A024R161 153 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 F5H423 210 aaPredicted RBP10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 ATP8B1O43520 1251 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 PGK1P00558 417 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 TAS2R40P59535 323 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 NNTQ13423 1086 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 TLK2Q86UE8 772 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 ABRAQ8N0Z2 381 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 SYT11Q9BT88 431 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 COQ4Q9Y3A0 265 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 RBBP6Q7Z6E9 1792 aaKnown RBP10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 GOLGA8MH3BSY2 632 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 PPEF2O14830 753 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 SYF2O95926 243 aaKnown RBP10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 RARAP10276 462 aa10.8□□□□□ -0.68
RBFOX1-202ENST00000340209 TBXAS1P24557 533 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms