RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PACSIN3Q9UKS6 424 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 CLEC11AQ9Y240 323 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 MYH10P35580 1976 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 ZBED1O96006 694 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 MAP4P27816 1152 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 OTUD4Q01804 1114 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 CC2D2BQ6DHV5 1058 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 AFAP1L2Q8N4X5 818 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 SCFD1Q8WVM8 642 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 ELMO3Q96BJ8 720 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 TEKT3Q9BXF9 490 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 PAIP1Q9H074 479 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 CCDC68Q9H2F9 335 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 ERVK-5Q9HDB9 667 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 FBXO6Q9NRD1 293 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 ZMYND8Q9ULU4 1186 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 DYTNA2CJ06 578 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 PSMA2P25787 234 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 DMPKQ09013 629 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 FSCBQ5H9T9 825 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 PCNX4Q63HM2 1172 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 ANO7Q6IWH7 933 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 MARK2Q7KZI7 788 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 ZNF75CPQ92670 426 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 INPP5DQ92835 1189 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 GFM2Q969S9 779 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 E2F7Q96AV8 911 aa13.93□□□□□ -0.18
COL2A1-201ENST00000337299 UPF3AQ9H1J1 476 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 TMA7Q9Y2S6 64 aaKnown RBP13.93□□□□□ -0.18
COL2A1-201ENST00000337299 KIAA1210Q9ULL0 1709 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 LIN7AO14910 233 aaPredicted RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 PEX1O43933 1283 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 RPA3P35244 121 aaPredicted RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 GRAPQ13588 217 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 GPATCH4Q5T3I0 446 aaKnown RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 PRUNE1Q86TP1 453 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 RNF148Q8N7C7 305 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 GRAPLQ8TC17 118 aaPredicted RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 SYT15Q9BQS2 421 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 KLHL4Q9C0H6 718 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 NXF1Q9UBU9 619 aaKnown RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 STRIP2Q9ULQ0 834 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 TLR2O60603 784 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 RXRBP28702 533 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 MLH1P40692 756 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 DMP1Q13316 513 aaPredicted RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 KHDC1Q4VXA5 237 aaKnown RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 LRRC8BQ6P9F7 803 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 NANOGNBQ7Z5D8 188 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 FAM228AQ86W67 206 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 TCP10LQ8TDR4 215 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 NDUFA13Q9P0J0 144 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 SLC16A4O15374 487 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 DUPD1Q68J44 220 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 KCNK18Q7Z418 384 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 EFCAB3Q8N7B9 438 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 ITFG2Q969R8 447 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 DNAJC1Q96KC8 554 aaKnown RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 PURBQ96QR8 312 aaKnown RBP13.92□□□□□ -0.18
COL2A1-201ENST00000337299 ING2Q9H160 280 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 CHST7Q9NS84 486 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 AURKCQ9UQB9 309 aa13.92□□□□□ -0.18
COL2A1-201ENST00000337299 LRRIQ4A6NIV6 560 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 TRIM49D1C9J1S8 452 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 NUDT17P0C025 328 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 POLR2BP30876 1174 aaKnown RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 ABCD1P33897 745 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 CHKAP35790 457 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 PPP6R3Q5H9R7 873 aaPredicted RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 NR1H4Q96RI1 486 aaPredicted RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 TMEM206Q9H813 350 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 TAS2R14Q9NYV8 317 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 TPST1O60507 370 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 CYP11B2P19099 503 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 CIITAP33076 1130 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 CERKLQ49MI3 558 aaPredicted RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 NDUFAF2Q8N183 169 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 CCNYL1Q8N7R7 359 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 EIF1ADQ8N9N8 165 aaKnown RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 IL1RAPL1Q9NZN1 696 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 WEE2P0C1S8 567 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 GARSP41250 739 aaKnown RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 COPAP53621 1224 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 DCTN2Q13561 401 aaKnown RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 PRPSAP1Q14558 356 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 TRMT5Q32P41 509 aaKnown RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 RNF43Q68DV7 783 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 PRELID2Q8N945 189 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 DDHD1Q8NEL9 900 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 NKX2-3Q8TAU0 364 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 DDX28Q9NUL7 540 aaKnown RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 SLC12A4Q9UP95 1085 aa13.91□□□□□ -0.18
COL2A1-201ENST00000337299 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
COL2A1-201ENST00000337299 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.18
COL2A1-201ENST00000337299 GDF11O95390 407 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms