RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 MAP3K13O43283 966 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 SNRNP35Q16560 246 aaKnown RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 GRAMD1BQ3KR37 738 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 WWP1Q9H0M0 922 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 SLC25A13Q9UJS0 675 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 SULT1E1P49888 294 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 NCALDP61601 193 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 TGM3Q08188 693 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 TAB3Q8N5C8 712 aaPredicted RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 C17orf102A2RUQ5 167 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 GTPBP10A4D1E9 387 aaKnown RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 GSG1L2A8MUP6 293 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 H0Y626 953 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 KCNN4O15554 427 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 TRIM16O95361 564 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 POLBP06746 335 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 PMS2P54278 862 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 ZNF438Q7Z4V0 828 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 SYN2Q92777 582 aaPredicted RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 MRPL1Q9BYD6 325 aaKnown RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 SLC30A1Q9Y6M5 507 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 PTPAQ15257 358 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 ZNF555Q8NEP9 628 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 CDY2AQ9Y6F7 541 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 CDY1Q9Y6F8 540 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 UBXN8O00124 270 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 WDR72Q3MJ13 1102 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 ZNF394Q53GI3 561 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 ZC3H12BQ5HYM0 836 aaKnown RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 C11orf57Q6ZUT1 292 aaPredicted RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 TRIML2Q8N7C3 387 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 VPS11Q9H270 941 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 HIST2H2ACQ16777 129 aaPredicted RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 HIST2H2AA3Q6FI13 130 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 MB21D2Q8IYB1 491 aaPredicted RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 GPRASP2Q96D09 838 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 SIK2Q9H0K1 926 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 COPG1Q9Y678 874 aaKnown RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 ERCC6L2Q5T890 1561 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 C2orf81A6NN90 581 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 RPL10AP62906 217 aaKnown RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 MOXD1Q6UVY6 613 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 PTPRN2Q92932 1015 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 ARL8AQ96BM9 186 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 AGPAT1Q99943 283 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 LRRC53A6NM62 1247 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 FAM107AO95990 144 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 IGKV5-2P06315 115 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 TWF1Q12792 350 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 GNASQ5JWF2 1037 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 GPIHBP1Q8IV16 184 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 ENGASEQ8NFI3 743 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 LCP1P13796 627 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 ARSEP51690 589 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 TRIM48Q8IWZ4 208 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 ACRBPQ8NEB7 543 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 APBB2Q92870 758 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 INTS2Q9H0H0 1204 aaKnown RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 APRTP07741 180 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 PYGMP11217 842 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 ADORA2BP29275 332 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
FN1-202ENST00000336916 ERO1BQ86YB8 467 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 CNPY3Q9BT09 278 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 F9P00740 461 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 SRBD1Q8N5C6 995 aaKnown RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 OLFM3Q96PB7 478 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 C11orf70Q9BRQ4 267 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 TUBGCP4Q9UGJ1 667 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 VWDEQ8N2E2 1590 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 NCAM2O15394 837 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 CFLARO15519 480 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 CDH16O75309 829 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 TOMM70O94826 608 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 KRT14P02533 472 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 FMO5P49326 533 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 GRAMD1CQ8IYS0 662 aa12.85□□□□□ -0.35
FN1-202ENST00000336916 NOP53Q9NZM5 478 aaKnown RBP12.85□□□□□ -0.35
FN1-202ENST00000336916 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 FOXO4P98177 505 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 PCBP1Q15365 356 aaKnown RBP eCLIP12.84□□□□□ -0.351e-61■□□□□ 8.9
FN1-202ENST00000336916 SLC18A3Q16572 532 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 SPDYE7PQ495Y7 208 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 CCNJLQ8IV13 435 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 CERKQ8TCT0 537 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 FAR2Q96K12 515 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 CASS4Q9NQ75 786 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 TADA3O75528 432 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms