RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TRIM42Q8IWZ5 723 aa25.7■■□□□ 1.71
SOX1-201ENST00000330949 LARGE2Q8N3Y3 721 aa25.7■■□□□ 1.71
SOX1-201ENST00000330949 RTFDC1Q9BY42 306 aaPredicted RBP25.7■■□□□ 1.71
SOX1-201ENST00000330949 ATMINO43313 823 aaPredicted RBP25.7■■□□□ 1.7
SOX1-201ENST00000330949 SERPINB3P29508 390 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 RGS2P41220 211 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 GPSM2P81274 684 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 MAP3K10Q02779 954 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 KCNA1Q09470 495 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 ZCCHC9Q8N567 271 aaKnown RBP25.7■■□□□ 1.7
SOX1-201ENST00000330949 NEDD1Q8NHV4 660 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 CCDC110Q8TBZ0 833 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 PPP1R14BQ96C90 147 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 BTBD6Q96KE9 485 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 EPB41L1Q9H4G0 881 aa25.7■■□□□ 1.7
SOX1-201ENST00000330949 CIB2O75838 187 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 SLC16A2P36021 539 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 ITGA9Q13797 1035 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 HNRNPDQ14103 355 aaKnown RBP25.69■■□□□ 1.7
SOX1-201ENST00000330949 MFSD14BQ5SR56 506 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 ZNF746Q6NUN9 644 aaPredicted RBP25.69■■□□□ 1.7
SOX1-201ENST00000330949 KLC3Q6P597 504 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 ZNF804AQ7Z570 1209 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 MPP4Q96JB8 637 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 UVRAGQ9P2Y5 699 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 PLSCR1O15162 318 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 OVGP1Q12889 678 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.69■■□□□ 1.7
SOX1-201ENST00000330949 ANKS1BQ7Z6G8 1248 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 CATSPER3Q86XQ3 398 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.69■■□□□ 1.7
SOX1-201ENST00000330949 ERMNQ8TAM6 284 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 PTTG2Q9NZH5 202 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 COL5A3P25940 1745 aaPredicted RBP25.69■■□□□ 1.7
SOX1-201ENST00000330949 CENPCQ03188 943 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 KSR1Q8IVT5 923 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 RUSC1Q9BVN2 902 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 PHACTR1Q9C0D0 580 aa25.69■■□□□ 1.7
SOX1-201ENST00000330949 CNTNAP4Q9C0A0 1308 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 CYP1A2P05177 515 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 PIM1P11309 404 aaPredicted RBP25.68■■□□□ 1.7
SOX1-201ENST00000330949 ABCD1P33897 745 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 TMPRSS6Q8IU80 811 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 NGLY1Q96IV0 654 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 OLFML3Q9NRN5 406 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 FRMD4BQ9Y2L6 1034 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 ARFGEF1Q9Y6D6 1849 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 NRAPQ86VF7 1730 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 RIMBP2O15034 1052 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 PSMC6P62333 389 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 MED21Q13503 144 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 RASA2Q15283 850 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 SLFN12Q8IYM2 578 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 SAYSD1Q9NPB0 183 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 HSFX1Q9UBD0 423 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 NEU2Q9Y3R4 380 aa25.68■■□□□ 1.7
SOX1-201ENST00000330949 EIF3DO15371 548 aaKnown RBP eCLIP25.67■■□□□ 1.7
SOX1-201ENST00000330949 PLS3P13797 630 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 STAT3P40763 770 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 PIK3CAP42336 1068 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 GSTO1P78417 241 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 CATSPER2Q96P56 530 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 FBXO6Q9NRD1 293 aaPredicted RBP25.67■■□□□ 1.7
SOX1-201ENST00000330949 ZDHHC7Q9NXF8 308 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 GTF3C4Q9UKN8 822 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 RSPH10B2B2RC85 870 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 ZBED4O75132 1171 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 RSPH10BP0C881 870 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 TRIM49P0CI25 452 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 TRIM49CP0CI26 452 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 ANKRD23Q86SG2 305 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 SLC24A2Q9UI40 661 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 CHMP2BQ9UQN3 213 aa25.67■■□□□ 1.7
SOX1-201ENST00000330949 GRM2Q14416 872 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 FAM91A1Q658Y4 838 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 RFX8Q6ZV50 586 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 LRRC6Q86X45 466 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 IRGQQ8WZA9 623 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 TTC1Q99614 292 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 EBF3Q9H4W6 596 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 MANSC1Q9H8J5 431 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 CD209Q9NNX6 404 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 UBE2TQ9NPD8 197 aaPredicted RBP25.66■■□□□ 1.7
SOX1-201ENST00000330949 PSMC3IPQ9P2W1 217 aaPredicted RBP25.66■■□□□ 1.7
SOX1-201ENST00000330949 UBAP1LF5GYI3 381 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 BAG2O95816 211 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 KRT4P19013 534 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 ADRA1DP25100 572 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 ACTR3P61158 418 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 HPCAP84074 193 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 GRAPQ13588 217 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 TTLL12Q14166 644 aaPredicted RBP25.66■■□□□ 1.7
SOX1-201ENST00000330949 PCNX4Q63HM2 1172 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 SCUBE1Q8IWY4 988 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 GRAPLQ8TC17 118 aaPredicted RBP25.66■■□□□ 1.7
SOX1-201ENST00000330949 TMEM120AQ9BXJ8 343 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 VPS11Q9H270 941 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 GPAMQ9HCL2 828 aa25.66■■□□□ 1.7
SOX1-201ENST00000330949 SNED1Q8TER0 1413 aa25.65■■□□□ 1.7
SOX1-201ENST00000330949 BTBD19C9JJ37 291 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms