RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 NUMBLQ9Y6R0 609 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 MOXD2PA6NHM9 499 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 CAPN9O14815 690 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 FSCN2O14926 492 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 SLC16A4O15374 487 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ATP9AO75110 1047 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 SP100P23497 879 aaPredicted RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 ADRA1DP25100 572 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 EFTUD2Q15029 972 aaKnown RBP eCLIP8.35□□□□□ -1.077e-10■■■■■ 36.6
VMA21-201ENST00000330374 FAM98CQ17RN3 349 aaKnown RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 CERKLQ49MI3 558 aaPredicted RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 ASAP3Q8TDY4 903 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 GRAMD1AQ96CP6 724 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 FIZ1Q96SL8 496 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 HSD17B14Q9BPX1 270 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 FBXO6Q9NRD1 293 aaPredicted RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 ETAA1Q9NY74 926 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 HSPBP1Q9NZL4 362 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 LRRC42Q9Y546 428 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ASMTLO95671 621 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 PECAM1P16284 738 aaPredicted RBP8.34□□□□□ -1.07
VMA21-201ENST00000330374 KRT4P19013 534 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 MARK3P27448 753 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 CETN2P41208 172 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 MRPS35P82673 323 aaKnown RBP8.34□□□□□ -1.07
VMA21-201ENST00000330374 Q4G0T1 1027 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 OTOP1Q7RTM1 612 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 NT5DC4Q86YG4 428 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 TEX9Q8N6V9 391 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 SCG3Q8WXD2 468 aaKnown RBP8.34□□□□□ -1.07
VMA21-201ENST00000330374 CYTH2Q99418 400 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 POLR3CQ9BUI4 534 aaPredicted RBP8.34□□□□□ -1.07
VMA21-201ENST00000330374 GTF3C4Q9UKN8 822 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 NEU2Q9Y3R4 380 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 ADGRA3Q8IWK6 1321 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 CYP3A4P08684 503 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 ARP10275 920 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 NDUFV2P19404 249 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 KCNA3P22001 575 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 SREBF1P36956 1147 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 GPS1Q13098 491 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 PTK6Q13882 451 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 STAT4Q14765 748 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 SYDE2Q5VT97 1194 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 TRABD2AQ86V40 505 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 CCNJLQ8IV13 435 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 GRK7Q8WTQ7 553 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 C7orf43Q8WVR3 580 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 STMN2Q93045 179 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 MIPEPQ99797 713 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 C11orf70Q9BRQ4 267 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 ZNF577Q9BSK1 485 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 GLT8D2Q9H1C3 349 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 DMAC2Q9NW81 257 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 ARMCX1Q9P291 453 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 GYG2O15488 501 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 ONECUT3O60422 494 aaPredicted RBP8.34□□□□□ -1.07
VMA21-201ENST00000330374 ADRB2P07550 413 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 NOVP48745 357 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 RAB27AP51159 221 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 FYB2Q5VWT5 728 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 PADI6Q6TGC4 694 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 TAS1R2Q8TE23 839 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 ARL8BQ9NVJ2 186 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 IRAK4Q9NWZ3 460 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 HEY2Q9UBP5 337 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.34□□□□□ -1.07
VMA21-201ENST00000330374 STARD13Q9Y3M8 1113 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
VMA21-201ENST00000330374 NDUFB5O43674 189 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 EDF1O60869 148 aaKnown RBP8.34□□□□□ -1.08
VMA21-201ENST00000330374 SKIV2L2P42285 1042 aaKnown RBP8.34□□□□□ -1.08
VMA21-201ENST00000330374 YARSP54577 528 aaKnown RBP8.34□□□□□ -1.08
VMA21-201ENST00000330374 MFAP3P55082 362 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 PEX3P56589 373 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 MFSD10Q14728 455 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 MAPK6Q16659 721 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 PARP6Q2NL67 630 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 CDC42EP5Q6NZY7 148 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 XXYLT1Q8NBI6 393 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 UNC45AQ9H3U1 944 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 SCOCQ9UIL1 159 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 USP20Q9Y2K6 914 aa8.34□□□□□ -1.08
VMA21-201ENST00000330374 ATAD5Q96QE3 1844 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 TBX3O15119 743 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 ATP5HO75947 161 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 BAG2O95816 211 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 NDUFB10O96000 172 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 ARSEP51690 589 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 DYNLT1P63172 113 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 ANKS1BQ7Z6G8 1248 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 LRRC6Q86X45 466 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 DAW1Q8N136 415 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 CERS5Q8N5B7 392 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 PDCD7Q8N8D1 485 aaKnown RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 RBBP8NLQ8NC74 664 aaPredicted RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 C10orf82Q8WW14 230 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 MAML1Q92585 1016 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 ZNF75CPQ92670 426 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms