RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TTC7AQ9ULT0 858 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-201ENST00000328923 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 STARD13Q9Y3M8 1113 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 BUD23O43709 281 aaKnown RBP12.51□□□□□ -0.41
SHMT2-201ENST00000328923 RPS6KA4O75676 772 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 STAMBPO95630 424 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 GAS8O95995 478 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 UQCRBP14927 111 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 ATP6V1B1P15313 513 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 SLC18A3Q16572 532 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 TMEM266Q2M3C6 531 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 UGT2A3Q6UWM9 527 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 NEK10Q6ZWH5 1172 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 CROCCP2Q86T23 111 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 C10orf82Q8WW14 230 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 GLG1Q92896 1179 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 SEMA6BQ9H3T3 888 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 PARVBQ9HBI1 364 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 ARL8BQ9NVJ2 186 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 SCHIP1Q9P0W5 487 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-201ENST00000328923 PPM1HQ9ULR3 514 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 PCDHA4Q9UN74 947 aa12.51□□□□□ -0.41
SHMT2-201ENST00000328923 RGPD3A6NKT7 1758 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 RGPD4Q7Z3J3 1758 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 C15orf38-AP3S2A0A0A6YYH1 394 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 LOC105371267A0A1B0GV96 52 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 TXNDC9O14530 226 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 GNA11P29992 359 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 PHBP35232 272 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 ASIC1P78348 528 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 HSP90AA5PQ58FG0 334 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 WDR45BQ5MNZ6 344 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 C10orf76Q5T2E6 689 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 PAOXQ6QHF9 649 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 ARPINQ7Z6K5 226 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 CLNKQ7Z7G1 428 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 PASD1Q8IV76 773 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 FAM20CQ8IXL6 584 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 DAGLBQ8NCG7 672 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 GPATCH1Q9BRR8 931 aaKnown RBP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 SIAEQ9HAT2 523 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 CCNL1Q9UK58 526 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 PFASO15067 1338 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 TTC34A8MYJ7 566 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 H3BSA7 217 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 M0R2N6 131 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 GNPATO15228 680 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 VCLP18206 1134 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 PLCG1P19174 1290 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 CSE1LP55060 971 aaKnown RBP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 VCPP55072 806 aaKnown RBP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 AQP4P55087 323 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 CHRNDQ07001 517 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 WASHC5Q12768 1159 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 ASPHQ12797 758 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 NONOQ15233 471 aaKnown RBP eCLIP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 SPOPLQ6IQ16 392 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 ADAT2Q7Z6V5 191 aaKnown RBP12.5□□□□□ -0.41
SHMT2-201ENST00000328923 VPS36Q86VN1 386 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 MCF2L2Q86YR7 1114 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 ANKMY2Q8IV38 441 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 KIAA0895Q8NCT3 520 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 IRF2BPLQ9H1B7 796 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 ATP6V0A2Q9Y487 856 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 NR2E3Q9Y5X4 410 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 TAF1P21675 1872 aa12.5□□□□□ -0.41
SHMT2-201ENST00000328923 KLRF2D3W0D1 207 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 SLC26A4O43511 780 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 SF3B3Q15393 1217 aaKnown RBP12.49□□□□□ -0.41
SHMT2-201ENST00000328923 FAM117BQ6P1L5 589 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 FBXL19Q6PCT2 694 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 DCDC5Q6ZRR9 648 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 LRRC49Q8IUZ0 686 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 GUF1Q8N442 669 aaKnown RBP12.49□□□□□ -0.41
SHMT2-201ENST00000328923 ESX1Q8N693 406 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 LRRC15Q8TF66 581 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 SAR1AQ9NR31 198 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 VPS51Q9UID3 782 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 MOSPD1Q9UJG1 213 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 MAD1L1Q9Y6D9 718 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 MYH11P35749 1972 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 FAM205AQ6ZU69 1335 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 A0A088AWK7 358 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 ARHGAP10A1A4S6 786 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 K7EPI3 171 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 CNOT3O75175 753 aaKnown RBP12.49□□□□□ -0.41
SHMT2-201ENST00000328923 CDH3P22223 829 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 HSD17B4P51659 736 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 DR1Q01658 176 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 STRN3Q13033 797 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 ARHGEF6Q15052 776 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms