RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 P2RX7Q99572 595 aaKnown RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 PACSIN1Q9BY11 444 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 ZNF768Q9H5H4 540 aaKnown RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 NRDE2Q9H7Z3 1164 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 SARS2Q9NP81 518 aaKnown RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 FBXO34Q9NWN3 711 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 CALCOCO1Q9P1Z2 691 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 CORO2BQ9UQ03 480 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.9□□□□□ -1.63
SKP1-201ENST00000328392 A0A088AWK7 358 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 CDHR4A6H8M9 788 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 AHRRA9YTQ3 701 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 NT5C1B-RDH14C9J2C7 533 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 LEFTY2O00292 366 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 GOLIM4O00461 696 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 TEX33O43247 280 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 MGEA5O60502 916 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 SNRPA1P09661 255 aaKnown RBP4.89□□□□□ -1.63
SKP1-201ENST00000328392 ZFP36P26651 326 aaKnown RBP4.89□□□□□ -1.63
SKP1-201ENST00000328392 PRDX5P30044 214 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 CACNB3P54284 484 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 FAM193AP78312 1265 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 HDAC1Q13547 482 aaPredicted RBP4.89□□□□□ -1.63
SKP1-201ENST00000328392 VPS72Q15906 364 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 LONRF1Q17RB8 773 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 CCDC93Q567U6 631 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 ATXN7L2Q5T6C5 722 aaPredicted RBP4.89□□□□□ -1.63
SKP1-201ENST00000328392 EFCAB12Q6NXP0 572 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 Q6ZPA2 131 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 MED25Q71SY5 747 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 GPRIN1Q7Z2K8 1008 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 SYT12Q8IV01 421 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 ZNF276Q8N554 614 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 CPT1CQ8TCG5 803 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 BRIX1Q8TDN6 353 aaKnown RBP4.89□□□□□ -1.63
SKP1-201ENST00000328392 C22orf23Q9BZE7 217 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 MRPL46Q9H2W6 279 aaKnown RBP4.89□□□□□ -1.63
SKP1-201ENST00000328392 ATP6V0A4Q9HBG4 840 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 DDX21Q9NR30 783 aaKnown RBP eCLIP4.89□□□□□ -1.63
SKP1-201ENST00000328392 CNNM1Q9NRU3 951 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 TPCN1Q9ULQ1 816 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 SNX13Q9Y5W8 968 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 USP19O94966 1318 aa4.89□□□□□ -1.63
SKP1-201ENST00000328392 TBKBP1A7MCY6 615 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 ZNF785A8K8V0 405 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 B5MCH6 92 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 KPNA5O15131 536 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 SCAF4O95104 1147 aaKnown RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 ARIH2O95376 493 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 PEX11BO96011 259 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 POMCP01189 267 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 ADH4P08319 380 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 GNAI3P08754 354 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 MTHFD1P11586 935 aaKnown RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 BRAFP15056 766 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 KRT4P19013 534 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 MAKP20794 623 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 APOBEC3AP31941 199 aaPredicted RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 IL12RB1P42701 662 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 PIK3CGP48736 1102 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 SOX8P57073 446 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 GNAI1P63096 354 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 FAM189BP81408 668 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 BIRC2Q13490 618 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 SEMA5AQ13591 1074 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 PABPC1LQ4VXU2 614 aaKnown RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 UTP14CQ5TAP6 766 aaKnown RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 OTUD7BQ6GQQ9 843 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 DOK3Q7L591 496 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 MRGPREQ86SM8 312 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 TBC1D15Q8TC07 691 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 SLC25A43Q8WUT9 341 aaPredicted RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 PMM1Q92871 262 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 NDC1Q9BTX1 674 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 NAA15Q9BXJ9 866 aaKnown RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 IKZF4Q9H2S9 585 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 WDCPQ9H6R7 721 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 BRD9Q9H8M2 597 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 CPNE7Q9UBL6 633 aa4.88□□□□□ -1.63
SKP1-201ENST00000328392 ARID4BQ4LE39 1312 aaPredicted RBP4.88□□□□□ -1.63
SKP1-201ENST00000328392 PHGDHO43175 533 aaKnown RBP4.87□□□□□ -1.63
SKP1-201ENST00000328392 AGFG2O95081 481 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 PRSS23O95084 383 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 GJB1P08034 283 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 SLC5A1P13866 664 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 NPR1P16066 1061 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 ZKSCAN1P17029 563 aaPredicted RBP4.87□□□□□ -1.63
SKP1-201ENST00000328392 CHN2P52757 468 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 GPSM2P81274 684 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 UBXN2BQ14CS0 331 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 BMT2Q1RMZ1 405 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 METTL24Q5JXM2 366 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 SEM1Q6ZVN7 128 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 LDLRAD3Q86YD5 345 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 FAM90A1Q86YD7 464 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 LIX1LQ8IVB5 337 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 SLC17A8Q8NDX2 589 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 OR10H5Q8NGA6 315 aa4.87□□□□□ -1.63
SKP1-201ENST00000328392 ZFP28Q8NHY6 868 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms