RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 COQ4Q9Y3A0 265 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 PCNX4Q63HM2 1172 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 CROCCP2Q86T23 111 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 ERP27Q96DN0 273 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 MYLK2Q9H1R3 596 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 APOBEC3GQ9HC16 384 aaKnown RBP21.06■□□□□ 0.96
CRLF3-201ENST00000324238 SEPT9Q9UHD8 586 aaPredicted RBP21.06■□□□□ 0.96
CRLF3-201ENST00000324238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.06■□□□□ 0.96
CRLF3-201ENST00000324238 GOLGA8RI6L899 631 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 PIK3CAP42336 1068 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 ALCAMQ13740 583 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 ZNF268Q14587 947 aaPredicted RBP21.05■□□□□ 0.96
CRLF3-201ENST00000324238 TDRD10Q5VZ19 366 aaKnown RBP21.05■□□□□ 0.96
CRLF3-201ENST00000324238 EP400NLQ6ZTU2 488 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 TAS1R3Q7RTX0 852 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 EXOC7Q9UPT5 735 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 PROSCO94903 275 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 MSH2P43246 934 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 GPS1Q13098 491 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 MAMLD1Q13495 774 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 MTERF2Q49AM1 385 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 BRDTQ58F21 947 aaPredicted RBP21.05■□□□□ 0.96
CRLF3-201ENST00000324238 GPD1LQ8N335 351 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 ZNF668Q96K58 619 aaPredicted RBP21.05■□□□□ 0.96
CRLF3-201ENST00000324238 MFSD14AQ96MC6 490 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 FNBP1Q96RU3 617 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 FAM167BQ9BTA0 163 aa21.05■□□□□ 0.96
CRLF3-201ENST00000324238 MAPTP10636 758 aaKnown RBP21.04■□□□□ 0.96
CRLF3-201ENST00000324238 RPA3P35244 121 aaPredicted RBP21.04■□□□□ 0.96
CRLF3-201ENST00000324238 KLF1Q13351 362 aaPredicted RBP21.04■□□□□ 0.96
CRLF3-201ENST00000324238 EFTUD2Q15029 972 aaKnown RBP eCLIP21.04■□□□□ 0.96
CRLF3-201ENST00000324238 MFSD7Q6UXD7 560 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 PDCD2LQ9BRP1 358 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 ATP6V0A4Q9HBG4 840 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 BRWD3Q6RI45 1802 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 F8VP50 259 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 CDH16O75309 829 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 PECAM1P16284 738 aaPredicted RBP21.04■□□□□ 0.96
CRLF3-201ENST00000324238 ARSEP51690 589 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 NRLP54845 237 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 VSIG1Q86XK7 387 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 C4orf19Q8IY42 314 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 NIM1KQ8IY84 436 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 SUPT20HQ8NEM7 779 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 NEU2Q9Y3R4 380 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 GJA3Q9Y6H8 435 aa21.04■□□□□ 0.96
CRLF3-201ENST00000324238 WDR64B1ANS9 1081 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 GCAP28676 217 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 NLRX1Q86UT6 975 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 ZBED8Q8IZ13 594 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 UTP4Q969X6 686 aaKnown RBP21.03■□□□□ 0.96
CRLF3-201ENST00000324238 MIEF2Q96C03 454 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 TMEM121Q9BTD3 319 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 RXFP1Q9HBX9 757 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 PRKAG3Q9UGI9 489 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 ZNF541Q9H0D2 1346 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 CFAP73A6NFT4 308 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 CBX6O95503 412 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 FGFR1P11362 822 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 WDR44Q5JSH3 913 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 TMEM130Q8N3G9 435 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 VTI1AQ96AJ9 217 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 ZNF570Q96NI8 536 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 NKX1-2Q9UD57 310 aaPredicted RBP21.03■□□□□ 0.96
CRLF3-201ENST00000324238 C15orf41Q9Y2V0 281 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 PCDHB2Q9Y5E7 798 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 IVNS1ABPQ9Y6Y0 642 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 H0Y3Z8 333 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 GNA15P30679 374 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 LIG4P49917 911 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 SLC1A5Q15758 541 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 ARHGEF18Q6ZSZ5 1173 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 MON1BQ7L1V2 547 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 GRK7Q8WTQ7 553 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 L3MBTL3Q96JM7 780 aaPredicted RBP21.03■□□□□ 0.96
CRLF3-201ENST00000324238 HAPLN2Q9GZV7 340 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 KIAA1586Q9HCI6 787 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 XPNPEP1Q9NQW7 623 aa21.03■□□□□ 0.96
CRLF3-201ENST00000324238 ATP5DP30049 168 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 OVGP1Q12889 678 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 NBPF12Q5TAG4 269 aaPredicted RBP21.02■□□□□ 0.96
CRLF3-201ENST00000324238 RHOT1Q8IXI2 618 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 OR5B17Q8NGF7 314 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 MAGEC3Q8TD91 643 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 SLCO2A1Q92959 643 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 IWS1Q96ST2 819 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 TRABDQ9H4I3 376 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 SLC24A3Q9HC58 644 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 MYOZ2Q9NPC6 264 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 RNF146Q9NTX7 359 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 TBC1D22BQ9NU19 505 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 FAM47DPA6NHR8 397 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 VNN1O95497 513 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 SMTNL2Q2TAL5 461 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 MAML1Q92585 1016 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 MAGEB18Q96M61 343 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 SLC38A10Q9HBR0 1119 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 PHTF1Q9UMS5 762 aa21.02■□□□□ 0.96
CRLF3-201ENST00000324238 CA4P22748 312 aa21.01■□□□□ 0.95
CRLF3-201ENST00000324238 MTFR1Q15390 333 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms